Protein–RNA interactions for Protein: P78413

IRX4, Iroquois-class homeodomain protein IRX-4, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX4P78413 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
IRX4P78413 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
IRX4P78413 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
IRX4P78413 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC15.81■□□□□ 0.12
IRX4P78413 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC15.81■□□□□ 0.12
IRX4P78413 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
IRX4P78413 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
IRX4P78413 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC15.8■□□□□ 0.12
IRX4P78413 AC005089.1-201ENST00000619486 2241 ntBASIC15.8■□□□□ 0.12
IRX4P78413 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
IRX4P78413 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
IRX4P78413 AGAP7P-201ENST00000582299 2062 ntBASIC15.8■□□□□ 0.12
IRX4P78413 AGAP14-201ENST00000624701 2060 ntBASIC15.8■□□□□ 0.12
IRX4P78413 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
IRX4P78413 AC127383.1-201ENST00000444697 1800 ntBASIC15.8■□□□□ 0.12
IRX4P78413 USP28-214ENST00000545540 3431 ntTSL 2 BASIC15.8■□□□□ 0.12
IRX4P78413 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
IRX4P78413 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
IRX4P78413 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC15.8■□□□□ 0.12
IRX4P78413 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
IRX4P78413 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
IRX4P78413 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
IRX4P78413 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
IRX4P78413 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
IRX4P78413 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
IRX4P78413 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC15.8■□□□□ 0.12
IRX4P78413 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
IRX4P78413 MGST3-203ENST00000367885 680 ntTSL 2 BASIC15.8■□□□□ 0.12
IRX4P78413 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
IRX4P78413 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
IRX4P78413 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC15.8■□□□□ 0.12
IRX4P78413 USB1-202ENST00000423271 1217 ntTSL 2 BASIC15.8■□□□□ 0.12
IRX4P78413 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC15.8■□□□□ 0.12
IRX4P78413 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC15.8■□□□□ 0.12
IRX4P78413 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC15.8■□□□□ 0.12
IRX4P78413 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC15.8■□□□□ 0.12
IRX4P78413 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC15.8■□□□□ 0.12
IRX4P78413 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC15.8■□□□□ 0.12
IRX4P78413 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC15.8■□□□□ 0.12
IRX4P78413 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
IRX4P78413 AGER-214ENST00000538695 487 ntTSL 2 BASIC15.8■□□□□ 0.12
IRX4P78413 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC15.8■□□□□ 0.12
IRX4P78413 PAM16-215ENST00000577031 548 ntTSL 4 BASIC15.8■□□□□ 0.12
IRX4P78413 MIR4313-201ENST00000580760 101 ntBASIC15.8■□□□□ 0.12
IRX4P78413 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC15.8■□□□□ 0.12
IRX4P78413 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC15.8■□□□□ 0.12
IRX4P78413 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
IRX4P78413 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
IRX4P78413 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
IRX4P78413 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC15.8■□□□□ 0.12
IRX4P78413 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC15.8■□□□□ 0.12
IRX4P78413 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
IRX4P78413 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
IRX4P78413 LINC01101-201ENST00000622953 1884 ntBASIC15.8■□□□□ 0.12
IRX4P78413 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
IRX4P78413 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
IRX4P78413 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC15.8■□□□□ 0.12
IRX4P78413 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
IRX4P78413 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
IRX4P78413 CYP4F24P-201ENST00000586049 1580 ntBASIC15.79■□□□□ 0.12
IRX4P78413 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC15.79■□□□□ 0.12
IRX4P78413 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
IRX4P78413 ZBTB45P2-201ENST00000452245 1531 ntBASIC15.79■□□□□ 0.12
IRX4P78413 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
IRX4P78413 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
IRX4P78413 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
IRX4P78413 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
IRX4P78413 REXO1L1P-202ENST00000608646 1974 ntBASIC15.79■□□□□ 0.12
IRX4P78413 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
IRX4P78413 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
IRX4P78413 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC15.79■□□□□ 0.12
IRX4P78413 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
IRX4P78413 AC004945.1-201ENST00000416738 983 ntBASIC15.79■□□□□ 0.12
IRX4P78413 AL442647.2-201ENST00000429864 857 ntBASIC15.79■□□□□ 0.12
IRX4P78413 FO681548.1-201ENST00000455617 1132 ntBASIC15.79■□□□□ 0.12
IRX4P78413 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC15.79■□□□□ 0.12
IRX4P78413 AC099548.2-209ENST00000480264 625 ntBASIC15.79■□□□□ 0.12
IRX4P78413 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
IRX4P78413 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
IRX4P78413 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC15.79■□□□□ 0.12
IRX4P78413 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC15.79■□□□□ 0.12
IRX4P78413 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC15.79■□□□□ 0.12
IRX4P78413 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC15.79■□□□□ 0.12
IRX4P78413 IGHV3OR16-16-201ENST00000563644 343 ntBASIC15.79■□□□□ 0.12
IRX4P78413 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC15.79■□□□□ 0.12
IRX4P78413 AC036164.1-201ENST00000570544 333 ntBASIC15.79■□□□□ 0.12
IRX4P78413 LINC01115-203ENST00000606068 577 ntBASIC15.79■□□□□ 0.12
IRX4P78413 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
IRX4P78413 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
IRX4P78413 AC139749.1-202ENST00000617529 3139 ntBASIC15.79■□□□□ 0.12
IRX4P78413 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
IRX4P78413 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
IRX4P78413 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
IRX4P78413 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
IRX4P78413 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
IRX4P78413 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
IRX4P78413 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
IRX4P78413 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
IRX4P78413 LINC00528-201ENST00000600723 2160 ntBASIC15.79■□□□□ 0.12
IRX4P78413 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC15.78■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 83.6 ms