Protein–RNA interactions for Protein: P55056

APOC4, Apolipoprotein C-IV, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC4P55056 NHLH2-202ENST00000369506 7226 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
APOC4P55056 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC11.05□□□□□ -0.64
APOC4P55056 SLC4A5-201ENST00000346834 6233 ntAPPRIS P4 TSL 5 BASIC11.05□□□□□ -0.64
APOC4P55056 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
APOC4P55056 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC11.05□□□□□ -0.64
APOC4P55056 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC11.05□□□□□ -0.64
APOC4P55056 SEMA6D-208ENST00000558014 6028 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
APOC4P55056 ARHGEF17-201ENST00000263674 7853 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
APOC4P55056 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
APOC4P55056 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
APOC4P55056 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
APOC4P55056 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
APOC4P55056 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
APOC4P55056 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC11.05□□□□□ -0.64
APOC4P55056 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
APOC4P55056 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
APOC4P55056 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC11.05□□□□□ -0.64
APOC4P55056 POM121L8P-201ENST00000417732 1281 ntBASIC11.05□□□□□ -0.64
APOC4P55056 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC11.05□□□□□ -0.64
APOC4P55056 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC11.05□□□□□ -0.64
APOC4P55056 POM121L9P-203ENST00000441984 1285 ntBASIC11.05□□□□□ -0.64
APOC4P55056 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC11.05□□□□□ -0.64
APOC4P55056 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC11.05□□□□□ -0.64
APOC4P55056 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
APOC4P55056 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
APOC4P55056 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
APOC4P55056 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC11.05□□□□□ -0.64
APOC4P55056 RPL13AP20-201ENST00000459725 609 ntBASIC11.05□□□□□ -0.64
APOC4P55056 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC11.05□□□□□ -0.64
APOC4P55056 CDC23-208ENST00000505120 455 ntTSL 3 BASIC11.05□□□□□ -0.64
APOC4P55056 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC11.05□□□□□ -0.64
APOC4P55056 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC11.05□□□□□ -0.64
APOC4P55056 USB1-203ENST00000539737 1212 ntTSL 2 BASIC11.05□□□□□ -0.64
APOC4P55056 MIR4525-201ENST00000580000 75 ntBASIC11.05□□□□□ -0.64
APOC4P55056 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC11.05□□□□□ -0.64
APOC4P55056 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC11.05□□□□□ -0.64
APOC4P55056 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC11.05□□□□□ -0.64
APOC4P55056 AC244157.2-201ENST00000616239 1006 ntBASIC11.05□□□□□ -0.64
APOC4P55056 AC138466.3-201ENST00000619983 221 ntBASIC11.05□□□□□ -0.64
APOC4P55056 TSPY26P-202ENST00000565928 3884 ntBASIC11.05□□□□□ -0.64
APOC4P55056 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
APOC4P55056 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
APOC4P55056 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
APOC4P55056 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
APOC4P55056 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC11.05□□□□□ -0.64
APOC4P55056 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
APOC4P55056 CACNA1G-208ENST00000442258 7226 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
APOC4P55056 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
APOC4P55056 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC11.05□□□□□ -0.64
APOC4P55056 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
APOC4P55056 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC11.05□□□□□ -0.64
APOC4P55056 TCF12-201ENST00000267811 6061 ntAPPRIS ALT1 TSL 1 (best) BASIC11.05□□□□□ -0.64
APOC4P55056 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
APOC4P55056 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
APOC4P55056 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
APOC4P55056 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC11.04□□□□□ -0.64
APOC4P55056 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
APOC4P55056 TCHH-202ENST00000614923 6995 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
APOC4P55056 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
APOC4P55056 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC11.04□□□□□ -0.64
APOC4P55056 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
APOC4P55056 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC11.04□□□□□ -0.64
APOC4P55056 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
APOC4P55056 AL137783.1-201ENST00000623494 1896 ntBASIC11.04□□□□□ -0.64
APOC4P55056 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC11.04□□□□□ -0.64
APOC4P55056 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC11.04□□□□□ -0.64
APOC4P55056 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC11.04□□□□□ -0.64
APOC4P55056 TMEM87B-201ENST00000283206 5212 ntAPPRIS P1 TSL 2 BASIC11.04□□□□□ -0.64
APOC4P55056 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
APOC4P55056 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC11.04□□□□□ -0.64
APOC4P55056 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
APOC4P55056 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC11.04□□□□□ -0.64
APOC4P55056 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC11.04□□□□□ -0.64
APOC4P55056 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
APOC4P55056 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC11.04□□□□□ -0.64
APOC4P55056 MYBBP1A-201ENST00000254718 4807 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
APOC4P55056 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
APOC4P55056 RPS3-201ENST00000278572 907 ntTSL 3 BASIC11.04□□□□□ -0.64
APOC4P55056 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
APOC4P55056 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC11.04□□□□□ -0.64
APOC4P55056 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
APOC4P55056 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC11.04□□□□□ -0.64
APOC4P55056 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC11.04□□□□□ -0.64
APOC4P55056 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC11.04□□□□□ -0.64
APOC4P55056 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
APOC4P55056 AC005324.3-201ENST00000455584 5514 ntAPPRIS P1 TSL 2 BASIC11.04□□□□□ -0.64
APOC4P55056 ATP6V0CP2-201ENST00000469409 207 ntBASIC11.04□□□□□ -0.64
APOC4P55056 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC11.04□□□□□ -0.64
APOC4P55056 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC11.04□□□□□ -0.64
APOC4P55056 NCK2-206ENST00000522586 490 ntTSL 5 BASIC11.04□□□□□ -0.64
APOC4P55056 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC11.04□□□□□ -0.64
APOC4P55056 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC11.04□□□□□ -0.64
APOC4P55056 AP006547.1-201ENST00000563435 692 ntBASIC11.04□□□□□ -0.64
APOC4P55056 PPY2P-201ENST00000582808 702 ntBASIC11.04□□□□□ -0.64
APOC4P55056 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
APOC4P55056 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC11.04□□□□□ -0.64
APOC4P55056 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC11.04□□□□□ -0.64
APOC4P55056 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
APOC4P55056 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
APOC4P55056 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC11.04□□□□□ -0.64
Retrieved 100 of 98,524 protein–RNA pairs in 66.1 ms