Protein–RNA interactions for Protein: P55036

PSMD4, 26S proteasome non-ATPase regulatory subunit 4, humanhuman

Known RBP Predictions only

Length 377 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD4P55036 APOA1-205ENST00000375329 927 ntTSL 2 BASIC14.11□□□□□ -0.15
PSMD4P55036 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
PSMD4P55036 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC14.11□□□□□ -0.15
PSMD4P55036 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
PSMD4P55036 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC14.11□□□□□ -0.15
PSMD4P55036 KRT18P25-201ENST00000508931 1278 ntBASIC14.11□□□□□ -0.15
PSMD4P55036 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
PSMD4P55036 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC14.11□□□□□ -0.15
PSMD4P55036 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC14.11□□□□□ -0.15
PSMD4P55036 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC14.11□□□□□ -0.15
PSMD4P55036 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
PSMD4P55036 AP001063.1-201ENST00000568332 529 ntBASIC14.11□□□□□ -0.15
PSMD4P55036 RPS15-205ENST00000586686 562 ntTSL 5 BASIC14.11□□□□□ -0.15
PSMD4P55036 RPS15-208ENST00000591804 711 ntTSL 5 BASIC14.11□□□□□ -0.15
PSMD4P55036 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
PSMD4P55036 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
PSMD4P55036 AP005019.2-201ENST00000615104 511 ntBASIC14.11□□□□□ -0.15
PSMD4P55036 AL603764.1-201ENST00000636452 321 ntBASIC14.11□□□□□ -0.15
PSMD4P55036 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
PSMD4P55036 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC14.11□□□□□ -0.15
PSMD4P55036 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
PSMD4P55036 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
PSMD4P55036 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
PSMD4P55036 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC14.11□□□□□ -0.15
PSMD4P55036 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
PSMD4P55036 AGER-206ENST00000375070 1463 ntTSL 5 BASIC14.11□□□□□ -0.15
PSMD4P55036 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
PSMD4P55036 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
PSMD4P55036 AL360270.3-201ENST00000609118 1348 ntBASIC14.11□□□□□ -0.15
PSMD4P55036 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
PSMD4P55036 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC14.11□□□□□ -0.15
PSMD4P55036 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
PSMD4P55036 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
PSMD4P55036 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC14.1□□□□□ -0.15
PSMD4P55036 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
PSMD4P55036 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC14.1□□□□□ -0.15
PSMD4P55036 ACIN1-201ENST00000262710 4935 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
PSMD4P55036 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
PSMD4P55036 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
PSMD4P55036 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
PSMD4P55036 MYOM3-202ENST00000374434 5804 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
PSMD4P55036 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
PSMD4P55036 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
PSMD4P55036 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
PSMD4P55036 RALGAPA1-201ENST00000307138 7911 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
PSMD4P55036 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
PSMD4P55036 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
PSMD4P55036 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC14.1□□□□□ -0.15
PSMD4P55036 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
PSMD4P55036 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
PSMD4P55036 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
PSMD4P55036 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
PSMD4P55036 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
PSMD4P55036 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
PSMD4P55036 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
PSMD4P55036 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
PSMD4P55036 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
PSMD4P55036 ACKR1-201ENST00000368121 1240 ntBASIC14.1□□□□□ -0.15
PSMD4P55036 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
PSMD4P55036 BRF1-202ENST00000379932 884 ntTSL 5 BASIC14.1□□□□□ -0.15
PSMD4P55036 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC14.1□□□□□ -0.15
PSMD4P55036 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC14.1□□□□□ -0.15
PSMD4P55036 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
PSMD4P55036 CTBP2P3-201ENST00000585629 1255 ntBASIC14.1□□□□□ -0.15
PSMD4P55036 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC14.1□□□□□ -0.15
PSMD4P55036 WFDC1-204ENST00000613603 549 ntBASIC14.1□□□□□ -0.15
PSMD4P55036 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
PSMD4P55036 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC14.1□□□□□ -0.15
PSMD4P55036 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
PSMD4P55036 CMTR2-201ENST00000338099 4869 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
PSMD4P55036 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC14.1□□□□□ -0.15
PSMD4P55036 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
PSMD4P55036 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
PSMD4P55036 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
PSMD4P55036 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC14.1□□□□□ -0.15
PSMD4P55036 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC14.1□□□□□ -0.15
PSMD4P55036 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
PSMD4P55036 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
PSMD4P55036 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
PSMD4P55036 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
PSMD4P55036 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
PSMD4P55036 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
PSMD4P55036 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
PSMD4P55036 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
PSMD4P55036 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
PSMD4P55036 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
PSMD4P55036 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
PSMD4P55036 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
PSMD4P55036 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC14.1□□□□□ -0.15
PSMD4P55036 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
PSMD4P55036 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
PSMD4P55036 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC14.1□□□□□ -0.15
PSMD4P55036 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
PSMD4P55036 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
PSMD4P55036 LILRP1-201ENST00000444199 1370 ntBASIC14.09□□□□□ -0.15
PSMD4P55036 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC14.09□□□□□ -0.15
PSMD4P55036 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
PSMD4P55036 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC14.09□□□□□ -0.15
PSMD4P55036 SNPH-201ENST00000381867 5533 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
PSMD4P55036 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 51.7 ms