Protein–RNA interactions for Protein: P54277

PMS1, PMS1 protein homolog 1, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1P54277 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
PMS1P54277 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
PMS1P54277 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
PMS1P54277 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC16.59■□□□□ 0.25
PMS1P54277 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
PMS1P54277 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
PMS1P54277 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
PMS1P54277 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
PMS1P54277 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
PMS1P54277 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PMS1P54277 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC16.59■□□□□ 0.25
PMS1P54277 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC16.59■□□□□ 0.25
PMS1P54277 AC041040.2-201ENST00000622926 2899 ntBASIC16.59■□□□□ 0.25
PMS1P54277 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
PMS1P54277 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PMS1P54277 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PMS1P54277 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PMS1P54277 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
PMS1P54277 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC16.58■□□□□ 0.25
PMS1P54277 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC16.58■□□□□ 0.25
PMS1P54277 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
PMS1P54277 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.25
PMS1P54277 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
PMS1P54277 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
PMS1P54277 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
PMS1P54277 AC005840.4-201ENST00000541242 2494 ntBASIC16.58■□□□□ 0.25
PMS1P54277 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC16.58■□□□□ 0.24
PMS1P54277 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
PMS1P54277 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC16.58■□□□□ 0.24
PMS1P54277 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
PMS1P54277 SOCS2P1-201ENST00000417727 557 ntBASIC16.58■□□□□ 0.24
PMS1P54277 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC16.58■□□□□ 0.24
PMS1P54277 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC16.58■□□□□ 0.24
PMS1P54277 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC16.58■□□□□ 0.24
PMS1P54277 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
PMS1P54277 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC16.58■□□□□ 0.24
PMS1P54277 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC16.58■□□□□ 0.24
PMS1P54277 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC16.58■□□□□ 0.24
PMS1P54277 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
PMS1P54277 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC16.58■□□□□ 0.24
PMS1P54277 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC16.58■□□□□ 0.24
PMS1P54277 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC16.58■□□□□ 0.24
PMS1P54277 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC16.58■□□□□ 0.24
PMS1P54277 AC008494.3-201ENST00000606615 944 ntBASIC16.58■□□□□ 0.24
PMS1P54277 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
PMS1P54277 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
PMS1P54277 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC16.58■□□□□ 0.24
PMS1P54277 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PMS1P54277 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
PMS1P54277 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PMS1P54277 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PMS1P54277 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PMS1P54277 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PMS1P54277 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC16.58■□□□□ 0.24
PMS1P54277 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PMS1P54277 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC16.58■□□□□ 0.24
PMS1P54277 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
PMS1P54277 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
PMS1P54277 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
PMS1P54277 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PMS1P54277 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PMS1P54277 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
PMS1P54277 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC16.57■□□□□ 0.24
PMS1P54277 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC16.57■□□□□ 0.24
PMS1P54277 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
PMS1P54277 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
PMS1P54277 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
PMS1P54277 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
PMS1P54277 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PMS1P54277 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
PMS1P54277 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
PMS1P54277 MSTO2P-201ENST00000314835 1709 ntBASIC16.57■□□□□ 0.24
PMS1P54277 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
PMS1P54277 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
PMS1P54277 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
PMS1P54277 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC16.57■□□□□ 0.24
PMS1P54277 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
PMS1P54277 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC16.57■□□□□ 0.24
PMS1P54277 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PMS1P54277 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
PMS1P54277 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
PMS1P54277 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
PMS1P54277 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PMS1P54277 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC16.57■□□□□ 0.24
PMS1P54277 AC236430.1-201ENST00000402231 743 ntBASIC16.57■□□□□ 0.24
PMS1P54277 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC16.57■□□□□ 0.24
PMS1P54277 AC114812.1-204ENST00000449669 728 ntBASIC16.57■□□□□ 0.24
PMS1P54277 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
PMS1P54277 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PMS1P54277 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC16.57■□□□□ 0.24
PMS1P54277 AC022616.1-201ENST00000518688 554 ntBASIC16.57■□□□□ 0.24
PMS1P54277 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC16.57■□□□□ 0.24
PMS1P54277 AC138761.1-201ENST00000584393 385 ntBASIC16.57■□□□□ 0.24
PMS1P54277 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC16.57■□□□□ 0.24
PMS1P54277 AC004233.3-201ENST00000607794 1269 ntBASIC16.57■□□□□ 0.24
PMS1P54277 WFDC1-204ENST00000613603 549 ntBASIC16.57■□□□□ 0.24
PMS1P54277 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
PMS1P54277 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC16.57■□□□□ 0.24
PMS1P54277 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PMS1P54277 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC16.57■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms