Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 LRRC59-203ENST00000576448 1531 ntBASIC14.66□□□□□ -0.06
PDX1P52945 AL158070.2-201ENST00000623713 1621 ntBASIC14.66□□□□□ -0.06
PDX1P52945 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
PDX1P52945 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
PDX1P52945 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC14.66□□□□□ -0.06
PDX1P52945 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
PDX1P52945 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC14.66□□□□□ -0.06
PDX1P52945 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
PDX1P52945 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC14.66□□□□□ -0.06
PDX1P52945 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
PDX1P52945 BCL11B-201ENST00000345514 7603 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
PDX1P52945 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC14.66□□□□□ -0.06
PDX1P52945 AC006486.2-201ENST00000624246 2199 ntBASIC14.66□□□□□ -0.06
PDX1P52945 AC023157.3-201ENST00000619086 2088 ntBASIC14.66□□□□□ -0.06
PDX1P52945 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
PDX1P52945 CCNA1-204ENST00000630422 1751 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
PDX1P52945 AC007787.1-201ENST00000588095 1583 ntBASIC14.66□□□□□ -0.06
PDX1P52945 RPS15-201ENST00000233609 534 ntTSL 2 BASIC14.66□□□□□ -0.06
PDX1P52945 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
PDX1P52945 AL138767.1-201ENST00000354527 744 ntTSL 3 BASIC14.66□□□□□ -0.06
PDX1P52945 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
PDX1P52945 AC092506.1-202ENST00000401022 528 ntBASIC14.66□□□□□ -0.06
PDX1P52945 TISP43-201ENST00000409793 538 ntTSL 4 BASIC14.66□□□□□ -0.06
PDX1P52945 EIF3FP3-201ENST00000434851 1086 ntBASIC14.66□□□□□ -0.06
PDX1P52945 PTPA-218ENST00000435132 618 ntTSL 2 BASIC14.66□□□□□ -0.06
PDX1P52945 POM121L10P-201ENST00000436994 1285 ntBASIC14.66□□□□□ -0.06
PDX1P52945 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC14.66□□□□□ -0.06
PDX1P52945 RNF41-210ENST00000552244 716 ntTSL 3 BASIC14.66□□□□□ -0.06
PDX1P52945 AC105129.2-201ENST00000559536 390 ntBASIC14.66□□□□□ -0.06
PDX1P52945 AC025810.1-201ENST00000569986 981 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
PDX1P52945 RPS15-205ENST00000586686 562 ntTSL 5 BASIC14.66□□□□□ -0.06
PDX1P52945 RPS15-208ENST00000591804 711 ntTSL 5 BASIC14.66□□□□□ -0.06
PDX1P52945 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
PDX1P52945 AL451050.2-201ENST00000606967 682 ntBASIC14.66□□□□□ -0.06
PDX1P52945 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC14.66□□□□□ -0.06
PDX1P52945 C18orf15-201ENST00000623680 2534 ntBASIC14.66□□□□□ -0.06
PDX1P52945 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC14.66□□□□□ -0.06
PDX1P52945 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC14.66□□□□□ -0.06
PDX1P52945 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
PDX1P52945 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
PDX1P52945 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
PDX1P52945 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC14.66□□□□□ -0.06
PDX1P52945 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
PDX1P52945 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC14.66□□□□□ -0.06
PDX1P52945 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
PDX1P52945 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
PDX1P52945 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
PDX1P52945 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC14.66□□□□□ -0.06
PDX1P52945 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
PDX1P52945 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC14.65□□□□□ -0.06
PDX1P52945 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
PDX1P52945 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC14.65□□□□□ -0.06
PDX1P52945 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC14.65□□□□□ -0.06
PDX1P52945 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC14.65□□□□□ -0.06
PDX1P52945 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
PDX1P52945 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
PDX1P52945 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
PDX1P52945 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
PDX1P52945 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
PDX1P52945 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
PDX1P52945 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
PDX1P52945 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC14.65□□□□□ -0.06
PDX1P52945 CSH2-202ENST00000345366 598 ntTSL 5 BASIC14.65□□□□□ -0.06
PDX1P52945 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
PDX1P52945 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
PDX1P52945 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC14.65□□□□□ -0.06
PDX1P52945 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC14.65□□□□□ -0.06
PDX1P52945 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
PDX1P52945 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC14.65□□□□□ -0.06
PDX1P52945 AC104758.2-201ENST00000562716 483 ntTSL 3 BASIC14.65□□□□□ -0.06
PDX1P52945 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
PDX1P52945 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
PDX1P52945 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC14.65□□□□□ -0.06
PDX1P52945 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
PDX1P52945 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC14.65□□□□□ -0.06
PDX1P52945 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
PDX1P52945 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
PDX1P52945 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
PDX1P52945 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
PDX1P52945 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
PDX1P52945 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
PDX1P52945 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
PDX1P52945 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
PDX1P52945 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
PDX1P52945 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
PDX1P52945 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC14.65□□□□□ -0.06
PDX1P52945 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC14.65□□□□□ -0.06
PDX1P52945 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC14.65□□□□□ -0.06
PDX1P52945 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
PDX1P52945 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC14.65□□□□□ -0.07
PDX1P52945 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC14.65□□□□□ -0.07
PDX1P52945 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
PDX1P52945 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
PDX1P52945 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
PDX1P52945 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
PDX1P52945 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC14.64□□□□□ -0.07
PDX1P52945 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC14.64□□□□□ -0.07
PDX1P52945 MAPK14-204ENST00000468133 1376 ntTSL 2 BASIC14.64□□□□□ -0.07
PDX1P52945 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
PDX1P52945 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms