Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC17.48■□□□□ 0.39
ERCC3P19447 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC17.48■□□□□ 0.39
ERCC3P19447 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC17.48■□□□□ 0.39
ERCC3P19447 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC17.48■□□□□ 0.39
ERCC3P19447 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC17.48■□□□□ 0.39
ERCC3P19447 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
ERCC3P19447 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
ERCC3P19447 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
ERCC3P19447 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
ERCC3P19447 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
ERCC3P19447 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
ERCC3P19447 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
ERCC3P19447 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
ERCC3P19447 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
ERCC3P19447 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC17.48■□□□□ 0.39
ERCC3P19447 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
ERCC3P19447 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ERCC3P19447 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC17.47■□□□□ 0.39
ERCC3P19447 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ERCC3P19447 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
ERCC3P19447 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
ERCC3P19447 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ERCC3P19447 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
ERCC3P19447 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC17.47■□□□□ 0.39
ERCC3P19447 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ERCC3P19447 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC17.47■□□□□ 0.39
ERCC3P19447 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
ERCC3P19447 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC17.47■□□□□ 0.39
ERCC3P19447 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ERCC3P19447 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
ERCC3P19447 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC17.47■□□□□ 0.39
ERCC3P19447 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ERCC3P19447 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC17.47■□□□□ 0.39
ERCC3P19447 AC092506.1-202ENST00000401022 528 ntBASIC17.47■□□□□ 0.39
ERCC3P19447 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC17.47■□□□□ 0.39
ERCC3P19447 AL391280.1-201ENST00000506969 1062 ntBASIC17.47■□□□□ 0.39
ERCC3P19447 PARP8-218ENST00000513738 596 ntTSL 4 BASIC17.47■□□□□ 0.39
ERCC3P19447 AC007663.3-201ENST00000609632 465 ntBASIC17.47■□□□□ 0.39
ERCC3P19447 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC17.47■□□□□ 0.39
ERCC3P19447 KRT8P4-201ENST00000509735 1454 ntBASIC17.47■□□□□ 0.39
ERCC3P19447 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ERCC3P19447 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
ERCC3P19447 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
ERCC3P19447 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC17.47■□□□□ 0.39
ERCC3P19447 AC068587.6-202ENST00000641839 5619 ntBASIC17.47■□□□□ 0.39
ERCC3P19447 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ERCC3P19447 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
ERCC3P19447 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC17.47■□□□□ 0.39
ERCC3P19447 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ERCC3P19447 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC17.47■□□□□ 0.39
ERCC3P19447 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
ERCC3P19447 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC17.47■□□□□ 0.39
ERCC3P19447 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ERCC3P19447 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC17.47■□□□□ 0.39
ERCC3P19447 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
ERCC3P19447 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
ERCC3P19447 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
ERCC3P19447 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
ERCC3P19447 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
ERCC3P19447 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC17.46■□□□□ 0.39
ERCC3P19447 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
ERCC3P19447 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
ERCC3P19447 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
ERCC3P19447 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
ERCC3P19447 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
ERCC3P19447 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC17.46■□□□□ 0.39
ERCC3P19447 KNCN-202ENST00000396314 608 ntAPPRIS P3 TSL 4 BASIC17.46■□□□□ 0.39
ERCC3P19447 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC17.46■□□□□ 0.39
ERCC3P19447 RGS5-214ENST00000429865 754 ntTSL 3 BASIC17.46■□□□□ 0.39
ERCC3P19447 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
ERCC3P19447 MDH2-205ENST00000461263 648 ntTSL 2 BASIC17.46■□□□□ 0.39
ERCC3P19447 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC17.46■□□□□ 0.39
ERCC3P19447 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC17.46■□□□□ 0.39
ERCC3P19447 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
ERCC3P19447 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC17.46■□□□□ 0.39
ERCC3P19447 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC17.46■□□□□ 0.39
ERCC3P19447 KLK11-210ENST00000600362 759 ntTSL 3 BASIC17.46■□□□□ 0.39
ERCC3P19447 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC17.46■□□□□ 0.39
ERCC3P19447 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
ERCC3P19447 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC17.46■□□□□ 0.39
ERCC3P19447 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
ERCC3P19447 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
ERCC3P19447 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
ERCC3P19447 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC17.46■□□□□ 0.39
ERCC3P19447 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
ERCC3P19447 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC17.46■□□□□ 0.39
ERCC3P19447 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC17.46■□□□□ 0.39
ERCC3P19447 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
ERCC3P19447 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC17.46■□□□□ 0.39
ERCC3P19447 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
ERCC3P19447 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
ERCC3P19447 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
ERCC3P19447 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
ERCC3P19447 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
ERCC3P19447 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.38
ERCC3P19447 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
ERCC3P19447 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
ERCC3P19447 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ERCC3P19447 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC17.45■□□□□ 0.38
ERCC3P19447 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms