Protein–RNA interactions for Protein: P12644

BMP4, Bone morphogenetic protein 4, humanhuman

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BMP4P12644 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC13.96□□□□□ -0.17
BMP4P12644 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
BMP4P12644 AL589739.1-201ENST00000607720 493 ntBASIC13.96□□□□□ -0.17
BMP4P12644 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC13.96□□□□□ -0.17
BMP4P12644 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
BMP4P12644 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
BMP4P12644 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
BMP4P12644 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
BMP4P12644 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
BMP4P12644 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.18
BMP4P12644 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC13.96□□□□□ -0.18
BMP4P12644 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.18
BMP4P12644 AC100757.3-201ENST00000622361 1406 ntBASIC13.96□□□□□ -0.18
BMP4P12644 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.18
BMP4P12644 SYN2-205ENST00000620175 3871 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
BMP4P12644 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.18
BMP4P12644 MED12L-202ENST00000309237 2862 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.18
BMP4P12644 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.18
BMP4P12644 BCAR1-208ENST00000542031 2846 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.18
BMP4P12644 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC13.95□□□□□ -0.18
BMP4P12644 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC13.95□□□□□ -0.18
BMP4P12644 TRIM10-204ENST00000449742 3546 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
BMP4P12644 VPS52-212ENST00000445902 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
BMP4P12644 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
BMP4P12644 KIFC3-202ENST00000421376 3128 ntTSL 2 BASIC13.95□□□□□ -0.18
BMP4P12644 MFSD11-217ENST00000590514 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
BMP4P12644 RELA-227ENST00000615805 2236 ntTSL 5 BASIC13.95□□□□□ -0.18
BMP4P12644 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
BMP4P12644 AP5Z1-201ENST00000348624 2901 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
BMP4P12644 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC13.95□□□□□ -0.18
BMP4P12644 AL139385.1-201ENST00000611744 3272 ntBASIC13.95□□□□□ -0.18
BMP4P12644 GNAS-215ENST00000371102 3438 ntTSL 5 BASIC13.95□□□□□ -0.18
BMP4P12644 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
BMP4P12644 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
BMP4P12644 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC13.95□□□□□ -0.18
BMP4P12644 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
BMP4P12644 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
BMP4P12644 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC13.95□□□□□ -0.18
BMP4P12644 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC13.95□□□□□ -0.18
BMP4P12644 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
BMP4P12644 AC113189.2-201ENST00000575310 1975 ntTSL 2 BASIC13.95□□□□□ -0.18
BMP4P12644 EHMT2-201ENST00000375528 4047 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
BMP4P12644 C1QTNF1-204ENST00000392445 2833 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
BMP4P12644 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
BMP4P12644 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
BMP4P12644 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
BMP4P12644 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC13.95□□□□□ -0.18
BMP4P12644 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC13.95□□□□□ -0.18
BMP4P12644 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC13.95□□□□□ -0.18
BMP4P12644 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC13.95□□□□□ -0.18
BMP4P12644 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
BMP4P12644 AC002472.2-201ENST00000442739 958 ntBASIC13.95□□□□□ -0.18
BMP4P12644 TAF8-206ENST00000472818 719 ntTSL 2 BASIC13.95□□□□□ -0.18
BMP4P12644 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC13.95□□□□□ -0.18
BMP4P12644 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC13.95□□□□□ -0.18
BMP4P12644 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC13.95□□□□□ -0.18
BMP4P12644 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
BMP4P12644 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC13.95□□□□□ -0.18
BMP4P12644 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC13.95□□□□□ -0.18
BMP4P12644 FHL2-212ENST00000607522 759 ntTSL 2 BASIC13.95□□□□□ -0.18
BMP4P12644 Metazoa_SRP.67-201ENST00000617099 296 ntBASIC13.95□□□□□ -0.18
BMP4P12644 AC008761.3-201ENST00000624803 892 ntBASIC13.95□□□□□ -0.18
BMP4P12644 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC13.95□□□□□ -0.18
BMP4P12644 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC13.95□□□□□ -0.18
BMP4P12644 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
BMP4P12644 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
BMP4P12644 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
BMP4P12644 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC13.95□□□□□ -0.18
BMP4P12644 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
BMP4P12644 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
BMP4P12644 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
BMP4P12644 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC13.95□□□□□ -0.18
BMP4P12644 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
BMP4P12644 KLHL34-201ENST00000379499 3641 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
BMP4P12644 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
BMP4P12644 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
BMP4P12644 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
BMP4P12644 AC022028.2-201ENST00000474115 2619 ntTSL 2 BASIC13.94□□□□□ -0.18
BMP4P12644 SPOCK3-218ENST00000511531 2908 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
BMP4P12644 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC13.94□□□□□ -0.18
BMP4P12644 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC13.94□□□□□ -0.18
BMP4P12644 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
BMP4P12644 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
BMP4P12644 KRBA2-202ENST00000396267 2562 ntTSL 2 BASIC13.94□□□□□ -0.18
BMP4P12644 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
BMP4P12644 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC13.94□□□□□ -0.18
BMP4P12644 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC13.94□□□□□ -0.18
BMP4P12644 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC13.94□□□□□ -0.18
BMP4P12644 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
BMP4P12644 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC13.94□□□□□ -0.18
BMP4P12644 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC13.94□□□□□ -0.18
BMP4P12644 PIK3R5-216ENST00000584803 2653 ntAPPRIS ALT1 TSL 5 BASIC13.94□□□□□ -0.18
BMP4P12644 FAM109A-201ENST00000361483 3256 ntAPPRIS ALT2 TSL 3 BASIC13.94□□□□□ -0.18
BMP4P12644 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
BMP4P12644 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
BMP4P12644 MARK1-201ENST00000366917 2946 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
BMP4P12644 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
BMP4P12644 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
BMP4P12644 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
BMP4P12644 AC236430.1-201ENST00000402231 743 ntBASIC13.94□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms