Protein–RNA interactions for Protein: P0DN86

CGB3, Choriogonadotropin subunit beta 3, humanhuman

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CGB3P0DN86 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC12.35□□□□□ -0.43
CGB3P0DN86 BX640514.1-201ENST00000583223 1918 ntBASIC12.35□□□□□ -0.43
CGB3P0DN86 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CGB3P0DN86 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
CGB3P0DN86 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
CGB3P0DN86 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC12.34□□□□□ -0.43
CGB3P0DN86 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CGB3P0DN86 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
CGB3P0DN86 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC12.34□□□□□ -0.43
CGB3P0DN86 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC12.34□□□□□ -0.43
CGB3P0DN86 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
CGB3P0DN86 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
CGB3P0DN86 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
CGB3P0DN86 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CGB3P0DN86 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
CGB3P0DN86 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC12.34□□□□□ -0.43
CGB3P0DN86 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC12.34□□□□□ -0.43
CGB3P0DN86 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CGB3P0DN86 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC12.34□□□□□ -0.43
CGB3P0DN86 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC12.34□□□□□ -0.43
CGB3P0DN86 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
CGB3P0DN86 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
CGB3P0DN86 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
CGB3P0DN86 AC005229.1-201ENST00000392885 409 ntBASIC12.34□□□□□ -0.43
CGB3P0DN86 AC092933.1-201ENST00000393644 945 ntBASIC12.34□□□□□ -0.43
CGB3P0DN86 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC12.34□□□□□ -0.43
CGB3P0DN86 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC12.34□□□□□ -0.43
CGB3P0DN86 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC12.34□□□□□ -0.43
CGB3P0DN86 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC12.34□□□□□ -0.43
CGB3P0DN86 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC12.34□□□□□ -0.43
CGB3P0DN86 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CGB3P0DN86 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC12.34□□□□□ -0.43
CGB3P0DN86 USP32P1-208ENST00000506594 1164 ntBASIC12.34□□□□□ -0.43
CGB3P0DN86 FUZ-207ENST00000526575 482 ntTSL 4 BASIC12.34□□□□□ -0.43
CGB3P0DN86 SLC25A47P1-201ENST00000531577 414 ntBASIC12.34□□□□□ -0.43
CGB3P0DN86 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC12.34□□□□□ -0.43
CGB3P0DN86 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC12.34□□□□□ -0.43
CGB3P0DN86 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC12.34□□□□□ -0.43
CGB3P0DN86 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC12.34□□□□□ -0.43
CGB3P0DN86 AC138696.2-201ENST00000607376 223 ntBASIC12.34□□□□□ -0.43
CGB3P0DN86 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
CGB3P0DN86 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CGB3P0DN86 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC12.34□□□□□ -0.43
CGB3P0DN86 AGGF1P1-201ENST00000509500 2073 ntBASIC12.34□□□□□ -0.43
CGB3P0DN86 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CGB3P0DN86 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CGB3P0DN86 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CGB3P0DN86 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CGB3P0DN86 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC12.34□□□□□ -0.43
CGB3P0DN86 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
CGB3P0DN86 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CGB3P0DN86 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CGB3P0DN86 AC097359.2-201ENST00000604992 2389 ntBASIC12.34□□□□□ -0.43
CGB3P0DN86 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC12.34□□□□□ -0.43
CGB3P0DN86 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC12.34□□□□□ -0.43
CGB3P0DN86 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CGB3P0DN86 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC12.34□□□□□ -0.43
CGB3P0DN86 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
CGB3P0DN86 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.43
CGB3P0DN86 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.43
CGB3P0DN86 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
CGB3P0DN86 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC12.33□□□□□ -0.44
CGB3P0DN86 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CGB3P0DN86 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC12.33□□□□□ -0.44
CGB3P0DN86 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CGB3P0DN86 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
CGB3P0DN86 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CGB3P0DN86 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC12.33□□□□□ -0.44
CGB3P0DN86 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC12.33□□□□□ -0.44
CGB3P0DN86 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
CGB3P0DN86 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
CGB3P0DN86 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
CGB3P0DN86 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CGB3P0DN86 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CGB3P0DN86 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CGB3P0DN86 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
CGB3P0DN86 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
CGB3P0DN86 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC12.33□□□□□ -0.44
CGB3P0DN86 MGST3-203ENST00000367885 680 ntTSL 2 BASIC12.33□□□□□ -0.44
CGB3P0DN86 CALY-203ENST00000368558 825 ntTSL 5 BASIC12.33□□□□□ -0.44
CGB3P0DN86 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CGB3P0DN86 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC12.33□□□□□ -0.44
CGB3P0DN86 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC12.33□□□□□ -0.44
CGB3P0DN86 RN7SL692P-201ENST00000464677 288 ntBASIC12.33□□□□□ -0.44
CGB3P0DN86 AC106760.1-201ENST00000508690 800 ntBASIC12.33□□□□□ -0.44
CGB3P0DN86 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC12.33□□□□□ -0.44
CGB3P0DN86 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC12.33□□□□□ -0.44
CGB3P0DN86 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC12.33□□□□□ -0.44
CGB3P0DN86 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC12.33□□□□□ -0.44
CGB3P0DN86 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC12.33□□□□□ -0.44
CGB3P0DN86 AC025279.2-201ENST00000569730 653 ntBASIC12.33□□□□□ -0.44
CGB3P0DN86 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
CGB3P0DN86 AC015936.2-201ENST00000593177 259 ntBASIC12.33□□□□□ -0.44
CGB3P0DN86 BX088702.1-201ENST00000610784 235 ntBASIC12.33□□□□□ -0.44
CGB3P0DN86 AC138466.3-201ENST00000619983 221 ntBASIC12.33□□□□□ -0.44
CGB3P0DN86 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
CGB3P0DN86 ETV2-208ENST00000621247 941 ntTSL 5 BASIC12.33□□□□□ -0.44
CGB3P0DN86 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
CGB3P0DN86 FOS-202ENST00000535987 1402 ntTSL 2 BASIC12.33□□□□□ -0.44
CGB3P0DN86 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 64.5 ms