Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RAB40ALP0C0E4 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
RAB40ALP0C0E4 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
RAB40ALP0C0E4 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
RAB40ALP0C0E4 HLA-K-203ENST00000430151 1046 ntBASIC14.23□□□□□ -0.13
RAB40ALP0C0E4 MESTP3-201ENST00000503460 968 ntBASIC14.23□□□□□ -0.13
RAB40ALP0C0E4 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC14.23□□□□□ -0.13
RAB40ALP0C0E4 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC14.23□□□□□ -0.13
RAB40ALP0C0E4 AC106820.3-201ENST00000561653 397 ntBASIC14.23□□□□□ -0.13
RAB40ALP0C0E4 SFTA2-203ENST00000634371 815 ntTSL 5 BASIC14.23□□□□□ -0.13
RAB40ALP0C0E4 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RAB40ALP0C0E4 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC14.23□□□□□ -0.13
RAB40ALP0C0E4 AC055811.4-201ENST00000624039 1754 ntBASIC14.23□□□□□ -0.13
RAB40ALP0C0E4 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RAB40ALP0C0E4 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RAB40ALP0C0E4 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
RAB40ALP0C0E4 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RAB40ALP0C0E4 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RAB40ALP0C0E4 AC138028.6-201ENST00000616106 1482 ntBASIC14.23□□□□□ -0.13
RAB40ALP0C0E4 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RAB40ALP0C0E4 GOLGA8DP-202ENST00000341390 2184 ntBASIC14.23□□□□□ -0.13
RAB40ALP0C0E4 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC14.23□□□□□ -0.13
RAB40ALP0C0E4 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RAB40ALP0C0E4 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC14.23□□□□□ -0.13
RAB40ALP0C0E4 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
RAB40ALP0C0E4 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
RAB40ALP0C0E4 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RAB40ALP0C0E4 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
RAB40ALP0C0E4 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RAB40ALP0C0E4 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC14.22□□□□□ -0.13
RAB40ALP0C0E4 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RAB40ALP0C0E4 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
RAB40ALP0C0E4 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC14.22□□□□□ -0.13
RAB40ALP0C0E4 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RAB40ALP0C0E4 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
RAB40ALP0C0E4 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RAB40ALP0C0E4 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
RAB40ALP0C0E4 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
RAB40ALP0C0E4 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
RAB40ALP0C0E4 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
RAB40ALP0C0E4 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
RAB40ALP0C0E4 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC14.22□□□□□ -0.13
RAB40ALP0C0E4 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC14.22□□□□□ -0.13
RAB40ALP0C0E4 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
RAB40ALP0C0E4 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC14.22□□□□□ -0.13
RAB40ALP0C0E4 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC14.22□□□□□ -0.13
RAB40ALP0C0E4 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC14.22□□□□□ -0.13
RAB40ALP0C0E4 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RAB40ALP0C0E4 CSH2-202ENST00000345366 598 ntTSL 5 BASIC14.22□□□□□ -0.13
RAB40ALP0C0E4 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
RAB40ALP0C0E4 GHSR-202ENST00000427970 912 ntBASIC14.22□□□□□ -0.13
RAB40ALP0C0E4 RGS5-214ENST00000429865 754 ntTSL 3 BASIC14.22□□□□□ -0.13
RAB40ALP0C0E4 AKR7A2P1-201ENST00000460134 915 ntBASIC14.22□□□□□ -0.13
RAB40ALP0C0E4 AL391280.1-201ENST00000506969 1062 ntBASIC14.22□□□□□ -0.13
RAB40ALP0C0E4 SCARNA20.5-201ENST00000516991 142 ntBASIC14.22□□□□□ -0.13
RAB40ALP0C0E4 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
RAB40ALP0C0E4 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
RAB40ALP0C0E4 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC14.22□□□□□ -0.13
RAB40ALP0C0E4 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
RAB40ALP0C0E4 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC14.22□□□□□ -0.13
RAB40ALP0C0E4 AC073413.1-201ENST00000603927 732 ntBASIC14.22□□□□□ -0.13
RAB40ALP0C0E4 AC138466.3-201ENST00000619983 221 ntBASIC14.22□□□□□ -0.13
RAB40ALP0C0E4 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC14.22□□□□□ -0.13
RAB40ALP0C0E4 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC14.22□□□□□ -0.13
RAB40ALP0C0E4 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC14.22□□□□□ -0.13
RAB40ALP0C0E4 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
RAB40ALP0C0E4 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
RAB40ALP0C0E4 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RAB40ALP0C0E4 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
RAB40ALP0C0E4 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RAB40ALP0C0E4 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RAB40ALP0C0E4 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RAB40ALP0C0E4 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
RAB40ALP0C0E4 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RAB40ALP0C0E4 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
RAB40ALP0C0E4 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC14.22□□□□□ -0.13
RAB40ALP0C0E4 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
RAB40ALP0C0E4 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
RAB40ALP0C0E4 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RAB40ALP0C0E4 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
RAB40ALP0C0E4 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
RAB40ALP0C0E4 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC14.21□□□□□ -0.13
RAB40ALP0C0E4 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC14.21□□□□□ -0.13
RAB40ALP0C0E4 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
RAB40ALP0C0E4 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC14.21□□□□□ -0.13
RAB40ALP0C0E4 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
RAB40ALP0C0E4 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
RAB40ALP0C0E4 AL360270.3-201ENST00000609118 1348 ntBASIC14.21□□□□□ -0.13
RAB40ALP0C0E4 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC14.21□□□□□ -0.13
RAB40ALP0C0E4 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
RAB40ALP0C0E4 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC14.21□□□□□ -0.13
RAB40ALP0C0E4 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
RAB40ALP0C0E4 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
RAB40ALP0C0E4 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
RAB40ALP0C0E4 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
RAB40ALP0C0E4 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC14.21□□□□□ -0.13
RAB40ALP0C0E4 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC14.21□□□□□ -0.13
RAB40ALP0C0E4 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC14.21□□□□□ -0.13
RAB40ALP0C0E4 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
RAB40ALP0C0E4 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms