Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 AL162727.3-201ENST00000635661 2787 ntBASIC17.66■□□□□ 0.42
HLA-DOAP06340 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HLA-DOAP06340 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
HLA-DOAP06340 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HLA-DOAP06340 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HLA-DOAP06340 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HLA-DOAP06340 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
HLA-DOAP06340 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HLA-DOAP06340 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HLA-DOAP06340 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC17.65■□□□□ 0.42
HLA-DOAP06340 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
HLA-DOAP06340 AC063926.3-201ENST00000624734 5658 ntBASIC17.65■□□□□ 0.42
HLA-DOAP06340 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
HLA-DOAP06340 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HLA-DOAP06340 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HLA-DOAP06340 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
HLA-DOAP06340 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
HLA-DOAP06340 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HLA-DOAP06340 CATSPERZ-201ENST00000328404 743 ntAPPRIS P5 TSL 1 (best) BASIC17.65■□□□□ 0.42
HLA-DOAP06340 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
HLA-DOAP06340 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
HLA-DOAP06340 KRTAP19-9P-201ENST00000421795 191 ntBASIC17.65■□□□□ 0.42
HLA-DOAP06340 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC17.65■□□□□ 0.42
HLA-DOAP06340 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC17.65■□□□□ 0.42
HLA-DOAP06340 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC17.65■□□□□ 0.42
HLA-DOAP06340 ALG3P1-201ENST00000508806 1114 ntBASIC17.65■□□□□ 0.42
HLA-DOAP06340 AC022217.1-201ENST00000521069 738 ntBASIC17.65■□□□□ 0.42
HLA-DOAP06340 SDHD-202ENST00000525291 790 ntTSL 3 BASIC17.65■□□□□ 0.42
HLA-DOAP06340 ERH-203ENST00000557016 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HLA-DOAP06340 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
HLA-DOAP06340 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
HLA-DOAP06340 AC132192.2-201ENST00000596206 1147 ntBASIC17.65■□□□□ 0.42
HLA-DOAP06340 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
HLA-DOAP06340 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
HLA-DOAP06340 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
HLA-DOAP06340 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC17.65■□□□□ 0.42
HLA-DOAP06340 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HLA-DOAP06340 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HLA-DOAP06340 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HLA-DOAP06340 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HLA-DOAP06340 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HLA-DOAP06340 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC17.65■□□□□ 0.42
HLA-DOAP06340 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
HLA-DOAP06340 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HLA-DOAP06340 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HLA-DOAP06340 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
HLA-DOAP06340 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.42
HLA-DOAP06340 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC17.64■□□□□ 0.42
HLA-DOAP06340 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.42
HLA-DOAP06340 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
HLA-DOAP06340 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.42
HLA-DOAP06340 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC17.64■□□□□ 0.42
HLA-DOAP06340 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
HLA-DOAP06340 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
HLA-DOAP06340 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
HLA-DOAP06340 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HLA-DOAP06340 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HLA-DOAP06340 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
HLA-DOAP06340 CCNA1-204ENST00000630422 1751 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
HLA-DOAP06340 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
HLA-DOAP06340 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
HLA-DOAP06340 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC17.64■□□□□ 0.41
HLA-DOAP06340 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HLA-DOAP06340 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
HLA-DOAP06340 SDCCAG3P2-201ENST00000326105 1023 ntBASIC17.64■□□□□ 0.41
HLA-DOAP06340 NFYC-202ENST00000372651 1202 ntAPPRIS P3 TSL 5 BASIC17.64■□□□□ 0.41
HLA-DOAP06340 CYP46A4P-201ENST00000414953 267 ntBASIC17.64■□□□□ 0.41
HLA-DOAP06340 AC127070.2-201ENST00000424075 555 ntTSL 2 BASIC17.64■□□□□ 0.41
HLA-DOAP06340 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
HLA-DOAP06340 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC17.64■□□□□ 0.41
HLA-DOAP06340 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC17.64■□□□□ 0.41
HLA-DOAP06340 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC17.64■□□□□ 0.41
HLA-DOAP06340 AC025810.1-201ENST00000569986 981 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
HLA-DOAP06340 AC005324.6-201ENST00000587972 613 ntBASIC17.64■□□□□ 0.41
HLA-DOAP06340 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC17.64■□□□□ 0.41
HLA-DOAP06340 KLK3-207ENST00000595952 969 ntTSL 3 BASIC17.64■□□□□ 0.41
HLA-DOAP06340 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC17.64■□□□□ 0.41
HLA-DOAP06340 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC17.64■□□□□ 0.41
HLA-DOAP06340 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.41
HLA-DOAP06340 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HLA-DOAP06340 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HLA-DOAP06340 MCHR2-202ENST00000369212 1311 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HLA-DOAP06340 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HLA-DOAP06340 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
HLA-DOAP06340 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
HLA-DOAP06340 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HLA-DOAP06340 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
HLA-DOAP06340 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC17.64■□□□□ 0.41
HLA-DOAP06340 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HLA-DOAP06340 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
HLA-DOAP06340 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
HLA-DOAP06340 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
HLA-DOAP06340 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HLA-DOAP06340 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
HLA-DOAP06340 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
HLA-DOAP06340 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC17.63■□□□□ 0.41
HLA-DOAP06340 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
HLA-DOAP06340 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HLA-DOAP06340 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
HLA-DOAP06340 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 97 ms