Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC14.22□□□□□ -0.13
PDGFAP04085 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
PDGFAP04085 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
PDGFAP04085 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
PDGFAP04085 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC14.21□□□□□ -0.13
PDGFAP04085 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC14.21□□□□□ -0.13
PDGFAP04085 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
PDGFAP04085 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
PDGFAP04085 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
PDGFAP04085 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
PDGFAP04085 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC14.21□□□□□ -0.13
PDGFAP04085 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
PDGFAP04085 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
PDGFAP04085 AC138028.6-201ENST00000616106 1482 ntBASIC14.21□□□□□ -0.13
PDGFAP04085 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
PDGFAP04085 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
PDGFAP04085 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
PDGFAP04085 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
PDGFAP04085 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
PDGFAP04085 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC14.21□□□□□ -0.13
PDGFAP04085 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
PDGFAP04085 SUN1-204ENST00000403868 978 ntTSL 2 BASIC14.21□□□□□ -0.13
PDGFAP04085 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
PDGFAP04085 MIR663B-201ENST00000408361 115 ntBASIC14.21□□□□□ -0.13
PDGFAP04085 KRTAP10-13P-201ENST00000412914 571 ntBASIC14.21□□□□□ -0.13
PDGFAP04085 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC14.21□□□□□ -0.13
PDGFAP04085 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC14.21□□□□□ -0.13
PDGFAP04085 AC004898.1-201ENST00000451057 766 ntBASIC14.21□□□□□ -0.13
PDGFAP04085 BX284668.4-201ENST00000453917 508 ntBASIC14.21□□□□□ -0.13
PDGFAP04085 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
PDGFAP04085 ADM-202ENST00000524948 584 ntTSL 2 BASIC14.21□□□□□ -0.13
PDGFAP04085 AC079328.1-201ENST00000560358 952 ntBASIC14.21□□□□□ -0.13
PDGFAP04085 AC025810.1-201ENST00000569986 981 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
PDGFAP04085 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC14.21□□□□□ -0.13
PDGFAP04085 RN7SL190P-201ENST00000582519 257 ntBASIC14.21□□□□□ -0.13
PDGFAP04085 EEF1DP1-201ENST00000585891 896 ntBASIC14.21□□□□□ -0.13
PDGFAP04085 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC14.21□□□□□ -0.13
PDGFAP04085 CYGB-203ENST00000589145 788 ntTSL 3 BASIC14.21□□□□□ -0.13
PDGFAP04085 AC243967.2-201ENST00000601409 567 ntTSL 4 BASIC14.21□□□□□ -0.13
PDGFAP04085 ECM1P1-201ENST00000604092 1279 ntBASIC14.21□□□□□ -0.13
PDGFAP04085 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
PDGFAP04085 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
PDGFAP04085 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC14.21□□□□□ -0.13
PDGFAP04085 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
PDGFAP04085 FOS-202ENST00000535987 1402 ntTSL 2 BASIC14.21□□□□□ -0.13
PDGFAP04085 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
PDGFAP04085 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
PDGFAP04085 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
PDGFAP04085 USP31-203ENST00000567975 2142 ntTSL 2 BASIC14.21□□□□□ -0.13
PDGFAP04085 AC005840.4-201ENST00000541242 2494 ntBASIC14.21□□□□□ -0.13
PDGFAP04085 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC14.21□□□□□ -0.13
PDGFAP04085 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
PDGFAP04085 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC14.21□□□□□ -0.14
PDGFAP04085 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
PDGFAP04085 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
PDGFAP04085 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.14
PDGFAP04085 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
PDGFAP04085 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.14
PDGFAP04085 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC14.21□□□□□ -0.14
PDGFAP04085 AC015818.8-201ENST00000587907 1519 ntBASIC14.2□□□□□ -0.14
PDGFAP04085 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC14.2□□□□□ -0.14
PDGFAP04085 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PDGFAP04085 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC14.2□□□□□ -0.14
PDGFAP04085 GSN-203ENST00000373808 2664 ntTSL 2 BASIC14.2□□□□□ -0.14
PDGFAP04085 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC14.2□□□□□ -0.14
PDGFAP04085 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC14.2□□□□□ -0.14
PDGFAP04085 AC007191.1-201ENST00000623179 2995 ntBASIC14.2□□□□□ -0.14
PDGFAP04085 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
PDGFAP04085 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
PDGFAP04085 TPO-203ENST00000346956 2923 ntTSL 5 BASIC14.2□□□□□ -0.14
PDGFAP04085 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC14.2□□□□□ -0.14
PDGFAP04085 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
PDGFAP04085 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
PDGFAP04085 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC14.2□□□□□ -0.14
PDGFAP04085 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC14.2□□□□□ -0.14
PDGFAP04085 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PDGFAP04085 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
PDGFAP04085 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
PDGFAP04085 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
PDGFAP04085 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PDGFAP04085 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PDGFAP04085 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PDGFAP04085 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
PDGFAP04085 MPV17-205ENST00000402310 906 ntTSL 5 BASIC14.2□□□□□ -0.14
PDGFAP04085 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
PDGFAP04085 REEP1-202ENST00000453231 940 ntTSL 2 BASIC14.2□□□□□ -0.14
PDGFAP04085 AC091804.1-201ENST00000486888 567 ntBASIC14.2□□□□□ -0.14
PDGFAP04085 SCARNA20.5-201ENST00000516991 142 ntBASIC14.2□□□□□ -0.14
PDGFAP04085 AC104241.2-201ENST00000532748 789 ntTSL 3 BASIC14.2□□□□□ -0.14
PDGFAP04085 AC105129.2-201ENST00000559536 390 ntBASIC14.2□□□□□ -0.14
PDGFAP04085 AC104758.2-201ENST00000562716 483 ntTSL 3 BASIC14.2□□□□□ -0.14
PDGFAP04085 TBC1D16-203ENST00000570373 961 ntTSL 5 BASIC14.2□□□□□ -0.14
PDGFAP04085 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC14.2□□□□□ -0.14
PDGFAP04085 Z84492.1-201ENST00000606589 408 ntAPPRIS P1 TSL 3 BASIC14.2□□□□□ -0.14
PDGFAP04085 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC14.2□□□□□ -0.14
PDGFAP04085 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC14.2□□□□□ -0.14
PDGFAP04085 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
PDGFAP04085 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PDGFAP04085 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC14.2□□□□□ -0.14
PDGFAP04085 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms