Protein–RNA interactions for Protein: P01375

TNF, Tumor necrosis factor, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFP01375 SALL4P5-201ENST00000419001 1760 ntBASIC14.66□□□□□ -0.06
TNFP01375 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TNFP01375 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TNFP01375 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TNFP01375 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
TNFP01375 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TNFP01375 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TNFP01375 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC14.66□□□□□ -0.06
TNFP01375 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
TNFP01375 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
TNFP01375 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC14.66□□□□□ -0.06
TNFP01375 TUBB8P8-201ENST00000458717 1058 ntBASIC14.66□□□□□ -0.06
TNFP01375 AC005740.2-201ENST00000511085 419 ntBASIC14.66□□□□□ -0.06
TNFP01375 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC14.66□□□□□ -0.06
TNFP01375 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC14.66□□□□□ -0.06
TNFP01375 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC14.66□□□□□ -0.06
TNFP01375 SFTA2-203ENST00000634371 815 ntTSL 5 BASIC14.66□□□□□ -0.06
TNFP01375 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TNFP01375 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC14.66□□□□□ -0.06
TNFP01375 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
TNFP01375 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TNFP01375 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC14.66□□□□□ -0.06
TNFP01375 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TNFP01375 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC14.66□□□□□ -0.06
TNFP01375 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TNFP01375 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
TNFP01375 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
TNFP01375 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TNFP01375 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC14.66□□□□□ -0.06
TNFP01375 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC14.66□□□□□ -0.06
TNFP01375 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TNFP01375 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
TNFP01375 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TNFP01375 AC009093.2-202ENST00000620513 2079 ntBASIC14.65□□□□□ -0.06
TNFP01375 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
TNFP01375 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TNFP01375 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
TNFP01375 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
TNFP01375 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
TNFP01375 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
TNFP01375 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC14.65□□□□□ -0.06
TNFP01375 AC003102.2-201ENST00000589195 1469 ntBASIC14.65□□□□□ -0.06
TNFP01375 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TNFP01375 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
TNFP01375 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
TNFP01375 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
TNFP01375 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
TNFP01375 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC14.65□□□□□ -0.06
TNFP01375 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC14.65□□□□□ -0.06
TNFP01375 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
TNFP01375 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC14.65□□□□□ -0.06
TNFP01375 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC14.65□□□□□ -0.06
TNFP01375 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC14.65□□□□□ -0.06
TNFP01375 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC14.65□□□□□ -0.06
TNFP01375 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
TNFP01375 BX284668.4-201ENST00000453917 508 ntBASIC14.65□□□□□ -0.06
TNFP01375 AC044849.1-201ENST00000519737 1188 ntBASIC14.65□□□□□ -0.06
TNFP01375 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
TNFP01375 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC14.65□□□□□ -0.06
TNFP01375 IGHV3OR16-16-201ENST00000563644 343 ntBASIC14.65□□□□□ -0.06
TNFP01375 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
TNFP01375 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
TNFP01375 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC14.65□□□□□ -0.06
TNFP01375 AC008825.2-201ENST00000603374 718 ntBASIC14.65□□□□□ -0.06
TNFP01375 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
TNFP01375 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TNFP01375 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
TNFP01375 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC14.65□□□□□ -0.06
TNFP01375 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
TNFP01375 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
TNFP01375 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
TNFP01375 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TNFP01375 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
TNFP01375 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC14.65□□□□□ -0.06
TNFP01375 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
TNFP01375 AC007326.2-201ENST00000624224 7579 ntBASIC14.65□□□□□ -0.06
TNFP01375 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TNFP01375 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
TNFP01375 AC023090.2-201ENST00000625182 2110 ntBASIC14.65□□□□□ -0.06
TNFP01375 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
TNFP01375 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TNFP01375 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TNFP01375 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TNFP01375 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TNFP01375 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
TNFP01375 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
TNFP01375 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC14.64□□□□□ -0.07
TNFP01375 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
TNFP01375 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC14.64□□□□□ -0.07
TNFP01375 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
TNFP01375 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TNFP01375 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TNFP01375 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
TNFP01375 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
TNFP01375 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC14.64□□□□□ -0.07
TNFP01375 AK6-201ENST00000380818 1183 ntTSL 2 BASIC14.64□□□□□ -0.07
TNFP01375 NKAIN1P1-201ENST00000435754 582 ntBASIC14.64□□□□□ -0.07
TNFP01375 RNMTL1P1-201ENST00000454103 560 ntBASIC14.64□□□□□ -0.07
TNFP01375 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC14.64□□□□□ -0.07
TNFP01375 TPI1-206ENST00000488464 791 ntTSL 5 BASIC14.64□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 108.6 ms