Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
CNOT4O95628 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC13.49□□□□□ -0.25
CNOT4O95628 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
CNOT4O95628 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC13.49□□□□□ -0.25
CNOT4O95628 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC13.49□□□□□ -0.25
CNOT4O95628 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CNOT4O95628 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC13.49□□□□□ -0.25
CNOT4O95628 MFF-223ENST00000524634 647 ntTSL 2 BASIC13.49□□□□□ -0.25
CNOT4O95628 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC13.49□□□□□ -0.25
CNOT4O95628 RPL28-207ENST00000558815 616 ntTSL 2 BASIC13.49□□□□□ -0.25
CNOT4O95628 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC13.49□□□□□ -0.25
CNOT4O95628 RPS24-214ENST00000613865 538 ntTSL 5 BASIC13.49□□□□□ -0.25
CNOT4O95628 AC132938.4-201ENST00000623835 848 ntBASIC13.49□□□□□ -0.25
CNOT4O95628 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC13.49□□□□□ -0.25
CNOT4O95628 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
CNOT4O95628 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CNOT4O95628 AL158070.2-201ENST00000623713 1621 ntBASIC13.49□□□□□ -0.25
CNOT4O95628 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC13.49□□□□□ -0.25
CNOT4O95628 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC13.49□□□□□ -0.25
CNOT4O95628 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC13.49□□□□□ -0.25
CNOT4O95628 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CNOT4O95628 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CNOT4O95628 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
CNOT4O95628 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC13.49□□□□□ -0.25
CNOT4O95628 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CNOT4O95628 AC126365.1-201ENST00000578585 1514 ntBASIC13.49□□□□□ -0.25
CNOT4O95628 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CNOT4O95628 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
CNOT4O95628 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CNOT4O95628 CRYBG1-204ENST00000633556 9909 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
CNOT4O95628 AC012508.2-201ENST00000567613 1472 ntBASIC13.48□□□□□ -0.25
CNOT4O95628 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC13.48□□□□□ -0.25
CNOT4O95628 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
CNOT4O95628 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
CNOT4O95628 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC13.48□□□□□ -0.25
CNOT4O95628 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC13.48□□□□□ -0.25
CNOT4O95628 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
CNOT4O95628 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
CNOT4O95628 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CNOT4O95628 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CNOT4O95628 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
CNOT4O95628 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CNOT4O95628 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
CNOT4O95628 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
CNOT4O95628 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CNOT4O95628 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC13.48□□□□□ -0.25
CNOT4O95628 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC13.48□□□□□ -0.25
CNOT4O95628 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CNOT4O95628 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
CNOT4O95628 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CNOT4O95628 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
CNOT4O95628 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CNOT4O95628 GUK1-206ENST00000366723 845 ntTSL 5 BASIC13.48□□□□□ -0.25
CNOT4O95628 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC13.48□□□□□ -0.25
CNOT4O95628 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
CNOT4O95628 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
CNOT4O95628 GZMB-202ENST00000382540 816 ntTSL 5 BASIC13.48□□□□□ -0.25
CNOT4O95628 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC13.48□□□□□ -0.25
CNOT4O95628 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CNOT4O95628 LSM5-207ENST00000410044 687 ntTSL 3 BASIC13.48□□□□□ -0.25
CNOT4O95628 AC016694.1-201ENST00000434179 700 ntBASIC13.48□□□□□ -0.25
CNOT4O95628 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
CNOT4O95628 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC13.48□□□□□ -0.25
CNOT4O95628 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
CNOT4O95628 AC079316.1-201ENST00000548397 411 ntBASIC13.48□□□□□ -0.25
CNOT4O95628 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC13.48□□□□□ -0.25
CNOT4O95628 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC13.48□□□□□ -0.25
CNOT4O95628 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC13.48□□□□□ -0.25
CNOT4O95628 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
CNOT4O95628 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CNOT4O95628 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
CNOT4O95628 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC13.48□□□□□ -0.25
CNOT4O95628 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CNOT4O95628 AC009090.5-201ENST00000624886 2285 ntBASIC13.48□□□□□ -0.25
CNOT4O95628 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CNOT4O95628 BID-213ENST00000615414 2236 ntTSL 5 BASIC13.48□□□□□ -0.25
CNOT4O95628 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
CNOT4O95628 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC13.48□□□□□ -0.25
CNOT4O95628 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
CNOT4O95628 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC13.48□□□□□ -0.25
CNOT4O95628 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC13.48□□□□□ -0.25
CNOT4O95628 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CNOT4O95628 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC13.48□□□□□ -0.25
CNOT4O95628 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CNOT4O95628 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
CNOT4O95628 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC13.48□□□□□ -0.25
CNOT4O95628 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
CNOT4O95628 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC13.47□□□□□ -0.25
CNOT4O95628 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
CNOT4O95628 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
CNOT4O95628 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC13.47□□□□□ -0.25
CNOT4O95628 KRT8P44-201ENST00000441609 1350 ntBASIC13.47□□□□□ -0.25
CNOT4O95628 ELK4-202ENST00000357992 10239 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CNOT4O95628 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC13.47□□□□□ -0.25
CNOT4O95628 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC13.47□□□□□ -0.25
CNOT4O95628 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC13.47□□□□□ -0.25
CNOT4O95628 WARS-232ENST00000556645 2508 ntTSL 5 BASIC13.47□□□□□ -0.25
CNOT4O95628 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
CNOT4O95628 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
CNOT4O95628 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC13.47□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 66.4 ms