Protein–RNA interactions for Protein: O43927

CXCL13, C-X-C motif chemokine 13, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL13O43927 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CXCL13O43927 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC13.52□□□□□ -0.25
CXCL13O43927 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CXCL13O43927 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CXCL13O43927 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
CXCL13O43927 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
CXCL13O43927 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CXCL13O43927 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CXCL13O43927 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
CXCL13O43927 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CXCL13O43927 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CXCL13O43927 AC011270.2-201ENST00000624293 2550 ntBASIC13.51□□□□□ -0.25
CXCL13O43927 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CXCL13O43927 AC007326.2-201ENST00000624224 7579 ntBASIC13.51□□□□□ -0.25
CXCL13O43927 GSN-215ENST00000545652 2428 ntTSL 2 BASIC13.51□□□□□ -0.25
CXCL13O43927 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC13.51□□□□□ -0.25
CXCL13O43927 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CXCL13O43927 LINC00528-201ENST00000600723 2160 ntBASIC13.51□□□□□ -0.25
CXCL13O43927 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
CXCL13O43927 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
CXCL13O43927 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
CXCL13O43927 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CXCL13O43927 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CXCL13O43927 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
CXCL13O43927 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CXCL13O43927 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CXCL13O43927 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC13.51□□□□□ -0.25
CXCL13O43927 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CXCL13O43927 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC13.51□□□□□ -0.25
CXCL13O43927 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CXCL13O43927 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC13.51□□□□□ -0.25
CXCL13O43927 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC13.51□□□□□ -0.25
CXCL13O43927 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CXCL13O43927 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CXCL13O43927 AHCYP2-201ENST00000430630 1300 ntBASIC13.51□□□□□ -0.25
CXCL13O43927 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CXCL13O43927 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
CXCL13O43927 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
CXCL13O43927 MPV17-206ENST00000402722 827 ntTSL 3 BASIC13.51□□□□□ -0.25
CXCL13O43927 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC13.51□□□□□ -0.25
CXCL13O43927 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CXCL13O43927 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC13.51□□□□□ -0.25
CXCL13O43927 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CXCL13O43927 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC13.51□□□□□ -0.25
CXCL13O43927 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC13.51□□□□□ -0.25
CXCL13O43927 CSF2RBP1-201ENST00000447905 391 ntBASIC13.51□□□□□ -0.25
CXCL13O43927 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC13.51□□□□□ -0.25
CXCL13O43927 BNIP3P42-201ENST00000454982 569 ntBASIC13.51□□□□□ -0.25
CXCL13O43927 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
CXCL13O43927 MFF-223ENST00000524634 647 ntTSL 2 BASIC13.51□□□□□ -0.25
CXCL13O43927 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC13.51□□□□□ -0.25
CXCL13O43927 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC13.51□□□□□ -0.25
CXCL13O43927 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC13.51□□□□□ -0.25
CXCL13O43927 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
CXCL13O43927 BNIP3P29-201ENST00000598302 571 ntBASIC13.51□□□□□ -0.25
CXCL13O43927 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC13.51□□□□□ -0.25
CXCL13O43927 AC011447.5-201ENST00000616168 564 ntBASIC13.51□□□□□ -0.25
CXCL13O43927 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC13.51□□□□□ -0.25
CXCL13O43927 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC13.51□□□□□ -0.25
CXCL13O43927 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
CXCL13O43927 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC13.51□□□□□ -0.25
CXCL13O43927 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC13.51□□□□□ -0.25
CXCL13O43927 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC13.51□□□□□ -0.25
CXCL13O43927 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CXCL13O43927 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC13.51□□□□□ -0.25
CXCL13O43927 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC13.51□□□□□ -0.25
CXCL13O43927 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CXCL13O43927 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CXCL13O43927 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CXCL13O43927 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CXCL13O43927 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
CXCL13O43927 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
CXCL13O43927 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC13.5□□□□□ -0.25
CXCL13O43927 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC13.5□□□□□ -0.25
CXCL13O43927 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
CXCL13O43927 CLUHP2-201ENST00000426660 1303 ntBASIC13.5□□□□□ -0.25
CXCL13O43927 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CXCL13O43927 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CXCL13O43927 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
CXCL13O43927 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
CXCL13O43927 FAM8A4P-201ENST00000435433 1213 ntBASIC13.5□□□□□ -0.25
CXCL13O43927 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
CXCL13O43927 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC13.5□□□□□ -0.25
CXCL13O43927 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC13.5□□□□□ -0.25
CXCL13O43927 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC13.5□□□□□ -0.25
CXCL13O43927 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC13.5□□□□□ -0.25
CXCL13O43927 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CXCL13O43927 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
CXCL13O43927 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CXCL13O43927 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC13.5□□□□□ -0.25
CXCL13O43927 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CXCL13O43927 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC13.5□□□□□ -0.25
CXCL13O43927 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC13.5□□□□□ -0.25
CXCL13O43927 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CXCL13O43927 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CXCL13O43927 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC13.5□□□□□ -0.25
CXCL13O43927 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC13.5□□□□□ -0.25
CXCL13O43927 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CXCL13O43927 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CXCL13O43927 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC13.5□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 77.2 ms