Protein–RNA interactions for Protein: O00533

CHL1, Neural cell adhesion molecule L1-like protein, humanhuman

Predictions only

Length 1,208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHL1O00533 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC19.18■□□□□ 0.66
CHL1O00533 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CHL1O00533 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC19.18■□□□□ 0.66
CHL1O00533 AL136172.1-201ENST00000598590 1394 ntBASIC19.18■□□□□ 0.66
CHL1O00533 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC19.17■□□□□ 0.66
CHL1O00533 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
CHL1O00533 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CHL1O00533 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CHL1O00533 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC19.17■□□□□ 0.66
CHL1O00533 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
CHL1O00533 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CHL1O00533 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CHL1O00533 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CHL1O00533 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CHL1O00533 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CHL1O00533 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC19.17■□□□□ 0.66
CHL1O00533 ING5-213ENST00000636051 4199 ntTSL 5 BASIC19.17■□□□□ 0.66
CHL1O00533 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
CHL1O00533 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CHL1O00533 F11R-206ENST00000621309 4770 ntTSL 5 BASIC19.17■□□□□ 0.66
CHL1O00533 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CHL1O00533 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CHL1O00533 HNRNPA1P32-201ENST00000396326 963 ntBASIC19.17■□□□□ 0.66
CHL1O00533 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CHL1O00533 AC044849.1-201ENST00000519737 1188 ntBASIC19.17■□□□□ 0.66
CHL1O00533 AC100827.2-201ENST00000563214 1194 ntBASIC19.17■□□□□ 0.66
CHL1O00533 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CHL1O00533 DIO1-215ENST00000610607 796 ntTSL 5 BASIC19.17■□□□□ 0.66
CHL1O00533 MVK-217ENST00000639206 367 ntTSL 5 BASIC19.17■□□□□ 0.66
CHL1O00533 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC19.17■□□□□ 0.66
CHL1O00533 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
CHL1O00533 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CHL1O00533 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
CHL1O00533 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC19.16■□□□□ 0.66
CHL1O00533 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CHL1O00533 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CHL1O00533 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC19.16■□□□□ 0.66
CHL1O00533 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC19.16■□□□□ 0.66
CHL1O00533 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CHL1O00533 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
CHL1O00533 AMT-239ENST00000636865 1914 ntTSL 5 BASIC19.16■□□□□ 0.66
CHL1O00533 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC19.16■□□□□ 0.66
CHL1O00533 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CHL1O00533 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CHL1O00533 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CHL1O00533 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CHL1O00533 AL157407.1-201ENST00000435784 904 ntBASIC19.16■□□□□ 0.66
CHL1O00533 SKA2-202ENST00000437036 625 ntTSL 2 BASIC19.16■□□□□ 0.66
CHL1O00533 AC091804.1-201ENST00000486888 567 ntBASIC19.16■□□□□ 0.66
CHL1O00533 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC19.16■□□□□ 0.66
CHL1O00533 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC19.16■□□□□ 0.66
CHL1O00533 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CHL1O00533 USP35-204ENST00000530267 2419 ntTSL 2 BASIC19.16■□□□□ 0.66
CHL1O00533 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CHL1O00533 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CHL1O00533 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
CHL1O00533 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CHL1O00533 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CHL1O00533 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
CHL1O00533 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
CHL1O00533 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CHL1O00533 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CHL1O00533 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CHL1O00533 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC19.16■□□□□ 0.66
CHL1O00533 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC19.15■□□□□ 0.66
CHL1O00533 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CHL1O00533 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC19.15■□□□□ 0.66
CHL1O00533 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CHL1O00533 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC19.15■□□□□ 0.66
CHL1O00533 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC19.15■□□□□ 0.66
CHL1O00533 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CHL1O00533 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
CHL1O00533 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC19.15■□□□□ 0.66
CHL1O00533 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CHL1O00533 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CHL1O00533 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
CHL1O00533 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CHL1O00533 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CHL1O00533 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CHL1O00533 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CHL1O00533 FAM58BP-201ENST00000439056 645 ntBASIC19.15■□□□□ 0.66
CHL1O00533 AL645933.1-201ENST00000440087 609 ntBASIC19.15■□□□□ 0.66
CHL1O00533 BX284668.4-201ENST00000453917 508 ntBASIC19.15■□□□□ 0.66
CHL1O00533 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC19.15■□□□□ 0.66
CHL1O00533 AC068587.8-201ENST00000641239 219 ntBASIC19.15■□□□□ 0.66
CHL1O00533 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC19.15■□□□□ 0.66
CHL1O00533 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CHL1O00533 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CHL1O00533 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
CHL1O00533 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC19.15■□□□□ 0.66
CHL1O00533 AC139712.1-201ENST00000378256 1875 ntBASIC19.15■□□□□ 0.66
CHL1O00533 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CHL1O00533 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
CHL1O00533 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC19.15■□□□□ 0.66
CHL1O00533 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC19.15■□□□□ 0.66
CHL1O00533 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CHL1O00533 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CHL1O00533 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
CHL1O00533 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CHL1O00533 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms