Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 C10orf88-204ENST00000481909 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
PDLIM1O00151 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
PDLIM1O00151 C7orf57-204ENST00000435376 1925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
PDLIM1O00151 C7orf57-206ENST00000539619 1927 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
PDLIM1O00151 ACIN1-202ENST00000338631 2445 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
PDLIM1O00151 TNIP3-201ENST00000057513 2416 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
PDLIM1O00151 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
PDLIM1O00151 MAP7-204ENST00000454590 3119 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
PDLIM1O00151 FAM189A2-204ENST00000455972 2107 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
PDLIM1O00151 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
PDLIM1O00151 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC14.48□□□□□ -0.09
PDLIM1O00151 AMT-224ENST00000635808 1610 ntTSL 5 BASIC14.48□□□□□ -0.09
PDLIM1O00151 ZBTB2-201ENST00000325144 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
PDLIM1O00151 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC14.48□□□□□ -0.09
PDLIM1O00151 IL13RA1-202ENST00000371666 4036 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
PDLIM1O00151 CABLES2-201ENST00000279101 3785 ntAPPRIS P2 TSL 5 BASIC14.48□□□□□ -0.09
PDLIM1O00151 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC14.48□□□□□ -0.09
PDLIM1O00151 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
PDLIM1O00151 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
PDLIM1O00151 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
PDLIM1O00151 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
PDLIM1O00151 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC14.48□□□□□ -0.09
PDLIM1O00151 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
PDLIM1O00151 AL139400.1-201ENST00000366220 510 ntBASIC14.48□□□□□ -0.09
PDLIM1O00151 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
PDLIM1O00151 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC14.48□□□□□ -0.09
PDLIM1O00151 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC14.48□□□□□ -0.09
PDLIM1O00151 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC14.48□□□□□ -0.09
PDLIM1O00151 HLA-J-203ENST00000494367 1087 ntBASIC14.48□□□□□ -0.09
PDLIM1O00151 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC14.48□□□□□ -0.09
PDLIM1O00151 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC14.48□□□□□ -0.09
PDLIM1O00151 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
PDLIM1O00151 AC097359.3-201ENST00000603982 1210 ntBASIC14.48□□□□□ -0.09
PDLIM1O00151 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC14.48□□□□□ -0.09
PDLIM1O00151 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
PDLIM1O00151 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
PDLIM1O00151 APOB-202ENST00000399256 3128 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
PDLIM1O00151 MED12L-202ENST00000309237 2862 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
PDLIM1O00151 TFIP11-201ENST00000405938 2896 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
PDLIM1O00151 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC14.48□□□□□ -0.09
PDLIM1O00151 MEAF6-204ENST00000373075 2147 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
PDLIM1O00151 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
PDLIM1O00151 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC14.48□□□□□ -0.09
PDLIM1O00151 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC14.48□□□□□ -0.09
PDLIM1O00151 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC14.48□□□□□ -0.09
PDLIM1O00151 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC14.48□□□□□ -0.09
PDLIM1O00151 ADCY8-202ENST00000377928 3363 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
PDLIM1O00151 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
PDLIM1O00151 SLC25A26-202ENST00000354883 2673 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
PDLIM1O00151 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
PDLIM1O00151 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
PDLIM1O00151 SF1-205ENST00000377394 2854 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
PDLIM1O00151 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC14.47□□□□□ -0.09
PDLIM1O00151 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
PDLIM1O00151 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
PDLIM1O00151 FAM167A-201ENST00000284486 4094 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
PDLIM1O00151 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
PDLIM1O00151 FFAR4-201ENST00000371481 3605 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
PDLIM1O00151 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
PDLIM1O00151 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC14.47□□□□□ -0.09
PDLIM1O00151 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
PDLIM1O00151 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
PDLIM1O00151 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC14.47□□□□□ -0.09
PDLIM1O00151 PDE9A-201ENST00000291539 2058 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
PDLIM1O00151 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
PDLIM1O00151 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
PDLIM1O00151 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
PDLIM1O00151 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
PDLIM1O00151 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
PDLIM1O00151 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC14.47□□□□□ -0.09
PDLIM1O00151 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
PDLIM1O00151 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
PDLIM1O00151 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
PDLIM1O00151 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
PDLIM1O00151 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC14.47□□□□□ -0.09
PDLIM1O00151 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC14.47□□□□□ -0.09
PDLIM1O00151 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC14.47□□□□□ -0.09
PDLIM1O00151 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC14.47□□□□□ -0.09
PDLIM1O00151 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC14.47□□□□□ -0.09
PDLIM1O00151 COQ9-214ENST00000567933 882 ntTSL 3 BASIC14.47□□□□□ -0.09
PDLIM1O00151 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC14.47□□□□□ -0.09
PDLIM1O00151 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC14.47□□□□□ -0.09
PDLIM1O00151 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
PDLIM1O00151 BAK1-203ENST00000442998 2212 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
PDLIM1O00151 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
PDLIM1O00151 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
PDLIM1O00151 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC14.47□□□□□ -0.09
PDLIM1O00151 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
PDLIM1O00151 KRT8P37-201ENST00000451609 1420 ntBASIC14.47□□□□□ -0.09
PDLIM1O00151 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC14.47□□□□□ -0.09
PDLIM1O00151 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
PDLIM1O00151 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
PDLIM1O00151 AC084364.1-201ENST00000551967 1556 ntBASIC14.47□□□□□ -0.09
PDLIM1O00151 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC14.47□□□□□ -0.09
PDLIM1O00151 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC14.47□□□□□ -0.09
PDLIM1O00151 SFSWAP-210ENST00000541286 3219 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
PDLIM1O00151 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC14.47□□□□□ -0.09
PDLIM1O00151 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC14.47□□□□□ -0.09
PDLIM1O00151 AOC4P-203ENST00000566825 2289 ntBASIC14.46□□□□□ -0.09
PDLIM1O00151 PAX2-202ENST00000361791 3193 ntAPPRIS ALT1 TSL 2 BASIC14.46□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 62.7 ms