Protein–RNA interactions for Protein: Q9Y5H4

PCDHGA1, Protocadherin gamma-A1, humanhuman

Predictions only

Length 931 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1Q9Y5H4 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
PCDHGA1Q9Y5H4 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
PCDHGA1Q9Y5H4 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
PCDHGA1Q9Y5H4 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
PCDHGA1Q9Y5H4 AC012441.2-201ENST00000444843 739 ntBASIC14.47□□□□□ -0.09
PCDHGA1Q9Y5H4 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
PCDHGA1Q9Y5H4 EFCAB10-201ENST00000460135 717 ntTSL 2 BASIC14.47□□□□□ -0.09
PCDHGA1Q9Y5H4 RCC2P8-201ENST00000502779 1035 ntBASIC14.47□□□□□ -0.09
PCDHGA1Q9Y5H4 AC116345.2-201ENST00000512837 523 ntBASIC14.47□□□□□ -0.09
PCDHGA1Q9Y5H4 AC104561.3-201ENST00000518590 715 ntTSL 5 BASIC14.47□□□□□ -0.09
PCDHGA1Q9Y5H4 POU5F1P2-201ENST00000521750 823 ntBASIC14.47□□□□□ -0.09
PCDHGA1Q9Y5H4 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
PCDHGA1Q9Y5H4 AL160314.3-201ENST00000556041 767 ntBASIC14.47□□□□□ -0.09
PCDHGA1Q9Y5H4 AC020763.1-201ENST00000567186 551 ntTSL 4 BASIC14.47□□□□□ -0.09
PCDHGA1Q9Y5H4 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
PCDHGA1Q9Y5H4 MIR4683-201ENST00000579659 81 ntBASIC14.47□□□□□ -0.09
PCDHGA1Q9Y5H4 MIR4754-201ENST00000582477 89 ntBASIC14.47□□□□□ -0.09
PCDHGA1Q9Y5H4 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC14.47□□□□□ -0.09
PCDHGA1Q9Y5H4 AC004466.1-201ENST00000599515 1080 ntBASIC14.47□□□□□ -0.09
PCDHGA1Q9Y5H4 ROPN1-211ENST00000620893 1006 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
PCDHGA1Q9Y5H4 TOMM7-207ENST00000621567 241 ntAPPRIS ALT1 TSL 5 BASIC14.47□□□□□ -0.09
PCDHGA1Q9Y5H4 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC14.47□□□□□ -0.09
PCDHGA1Q9Y5H4 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
PCDHGA1Q9Y5H4 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC14.47□□□□□ -0.09
PCDHGA1Q9Y5H4 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
PCDHGA1Q9Y5H4 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
PCDHGA1Q9Y5H4 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC14.47□□□□□ -0.09
PCDHGA1Q9Y5H4 ILF3-AS1-201ENST00000591501 1983 ntBASIC14.47□□□□□ -0.09
PCDHGA1Q9Y5H4 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC14.47□□□□□ -0.09
PCDHGA1Q9Y5H4 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
PCDHGA1Q9Y5H4 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
PCDHGA1Q9Y5H4 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
PCDHGA1Q9Y5H4 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
PCDHGA1Q9Y5H4 AC126755.1-201ENST00000525846 6405 ntBASIC14.46□□□□□ -0.09
PCDHGA1Q9Y5H4 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.09
PCDHGA1Q9Y5H4 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
PCDHGA1Q9Y5H4 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
PCDHGA1Q9Y5H4 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
PCDHGA1Q9Y5H4 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
PCDHGA1Q9Y5H4 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
PCDHGA1Q9Y5H4 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
PCDHGA1Q9Y5H4 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC14.46□□□□□ -0.09
PCDHGA1Q9Y5H4 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
PCDHGA1Q9Y5H4 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC14.46□□□□□ -0.09
PCDHGA1Q9Y5H4 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
PCDHGA1Q9Y5H4 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
PCDHGA1Q9Y5H4 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
PCDHGA1Q9Y5H4 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC14.46□□□□□ -0.09
PCDHGA1Q9Y5H4 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC14.46□□□□□ -0.09
PCDHGA1Q9Y5H4 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
PCDHGA1Q9Y5H4 ALG1L-201ENST00000340333 805 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
PCDHGA1Q9Y5H4 TOMM7-201ENST00000358435 778 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
PCDHGA1Q9Y5H4 FCRLB-202ENST00000367944 1172 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
PCDHGA1Q9Y5H4 FCRLB-203ENST00000367945 1131 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
PCDHGA1Q9Y5H4 Z82214.1-201ENST00000419643 988 ntTSL 3 BASIC14.46□□□□□ -0.09
PCDHGA1Q9Y5H4 RN7SL818P-201ENST00000485099 259 ntBASIC14.46□□□□□ -0.09
PCDHGA1Q9Y5H4 HLA-J-204ENST00000495278 958 ntBASIC14.46□□□□□ -0.09
PCDHGA1Q9Y5H4 AC026434.2-201ENST00000506094 1078 ntBASIC14.46□□□□□ -0.09
PCDHGA1Q9Y5H4 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC14.46□□□□□ -0.09
PCDHGA1Q9Y5H4 CPLX2-209ENST00000515094 576 ntAPPRIS P1 TSL 4 BASIC14.46□□□□□ -0.09
PCDHGA1Q9Y5H4 AC009779.1-201ENST00000551138 283 ntBASIC14.46□□□□□ -0.09
PCDHGA1Q9Y5H4 AC135983.1-201ENST00000562108 1097 ntTSL 2 BASIC14.46□□□□□ -0.09
PCDHGA1Q9Y5H4 SAXO2-207ENST00000566861 404 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.09
PCDHGA1Q9Y5H4 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC14.46□□□□□ -0.09
PCDHGA1Q9Y5H4 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
PCDHGA1Q9Y5H4 PYY-202ENST00000592796 580 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.09
PCDHGA1Q9Y5H4 IRF3-215ENST00000596822 823 ntTSL 3 BASIC14.46□□□□□ -0.09
PCDHGA1Q9Y5H4 RN7SL725P-201ENST00000606439 259 ntBASIC14.46□□□□□ -0.09
PCDHGA1Q9Y5H4 ALG1L-202ENST00000611639 701 ntAPPRIS ALT2 TSL 3 BASIC14.46□□□□□ -0.09
PCDHGA1Q9Y5H4 DNAJC17-212ENST00000627802 428 ntTSL 4 BASIC14.46□□□□□ -0.09
PCDHGA1Q9Y5H4 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC14.46□□□□□ -0.09
PCDHGA1Q9Y5H4 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
PCDHGA1Q9Y5H4 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC14.46□□□□□ -0.09
PCDHGA1Q9Y5H4 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
PCDHGA1Q9Y5H4 TSPY26P-202ENST00000565928 3884 ntBASIC14.46□□□□□ -0.1
PCDHGA1Q9Y5H4 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
PCDHGA1Q9Y5H4 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
PCDHGA1Q9Y5H4 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC14.46□□□□□ -0.1
PCDHGA1Q9Y5H4 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC14.46□□□□□ -0.1
PCDHGA1Q9Y5H4 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
PCDHGA1Q9Y5H4 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC14.46□□□□□ -0.1
PCDHGA1Q9Y5H4 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
PCDHGA1Q9Y5H4 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC14.45□□□□□ -0.1
PCDHGA1Q9Y5H4 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
PCDHGA1Q9Y5H4 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
PCDHGA1Q9Y5H4 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
PCDHGA1Q9Y5H4 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
PCDHGA1Q9Y5H4 HIGD1A-202ENST00000418900 1322 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
PCDHGA1Q9Y5H4 FAM45A-201ENST00000361432 1648 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
PCDHGA1Q9Y5H4 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
PCDHGA1Q9Y5H4 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
PCDHGA1Q9Y5H4 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC14.45□□□□□ -0.1
PCDHGA1Q9Y5H4 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
PCDHGA1Q9Y5H4 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
PCDHGA1Q9Y5H4 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
PCDHGA1Q9Y5H4 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC14.45□□□□□ -0.1
PCDHGA1Q9Y5H4 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
PCDHGA1Q9Y5H4 AC245369.1-201ENST00000390634 434 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
PCDHGA1Q9Y5H4 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
PCDHGA1Q9Y5H4 EVA1A-204ENST00000410071 777 ntAPPRIS P2 TSL 3 BASIC14.45□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 76 ms