Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
SHANK2Q9UPX8 CCNH-201ENST00000256897 1378 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
SHANK2Q9UPX8 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
SHANK2Q9UPX8 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC21.87■■□□□ 1.09
SHANK2Q9UPX8 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
SHANK2Q9UPX8 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC21.86■■□□□ 1.09
SHANK2Q9UPX8 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
SHANK2Q9UPX8 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC21.86■■□□□ 1.09
SHANK2Q9UPX8 RN7SL277P-201ENST00000481521 288 ntBASIC21.86■■□□□ 1.09
SHANK2Q9UPX8 AC114947.1-202ENST00000514136 344 ntBASIC21.86■■□□□ 1.09
SHANK2Q9UPX8 DNM1P30-201ENST00000563586 452 ntBASIC21.86■■□□□ 1.09
SHANK2Q9UPX8 EAF1-AS1-208ENST00000608408 770 ntTSL 5 BASIC21.86■■□□□ 1.09
SHANK2Q9UPX8 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
SHANK2Q9UPX8 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
SHANK2Q9UPX8 AC006486.2-201ENST00000624246 2199 ntBASIC21.86■■□□□ 1.09
SHANK2Q9UPX8 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
SHANK2Q9UPX8 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC21.86■■□□□ 1.09
SHANK2Q9UPX8 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
SHANK2Q9UPX8 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC21.86■■□□□ 1.09
SHANK2Q9UPX8 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
SHANK2Q9UPX8 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC21.86■■□□□ 1.09
SHANK2Q9UPX8 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
SHANK2Q9UPX8 CD1E-206ENST00000368161 1689 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
SHANK2Q9UPX8 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC21.85■■□□□ 1.09
SHANK2Q9UPX8 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC21.85■■□□□ 1.09
SHANK2Q9UPX8 AP002353.1-201ENST00000528257 1599 ntBASIC21.85■■□□□ 1.09
SHANK2Q9UPX8 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC21.85■■□□□ 1.09
SHANK2Q9UPX8 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
SHANK2Q9UPX8 CXCL12-202ENST00000374426 470 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
SHANK2Q9UPX8 AL512430.1-201ENST00000392575 860 ntBASIC21.85■■□□□ 1.09
SHANK2Q9UPX8 AL627231.1-201ENST00000394467 1125 ntBASIC21.85■■□□□ 1.09
SHANK2Q9UPX8 TP53I3-203ENST00000407482 747 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
SHANK2Q9UPX8 RPS9P1-201ENST00000419943 583 ntBASIC21.85■■□□□ 1.09
SHANK2Q9UPX8 IL1R2-203ENST00000441002 1106 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
SHANK2Q9UPX8 SOX9-AS1-207ENST00000446332 443 ntTSL 2 BASIC21.85■■□□□ 1.09
SHANK2Q9UPX8 CHCHD2P9-201ENST00000461726 456 ntBASIC21.85■■□□□ 1.09
SHANK2Q9UPX8 IGHV3-37-201ENST00000518544 340 ntBASIC21.85■■□□□ 1.09
SHANK2Q9UPX8 FXYD2-205ENST00000528014 672 ntAPPRIS P1 TSL 3 BASIC21.85■■□□□ 1.09
SHANK2Q9UPX8 TSHR-205ENST00000554263 1184 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
SHANK2Q9UPX8 TSHR-206ENST00000554435 1089 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
SHANK2Q9UPX8 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC21.85■■□□□ 1.09
SHANK2Q9UPX8 EXOSC5-204ENST00000596905 826 ntTSL 2 BASIC21.85■■□□□ 1.09
SHANK2Q9UPX8 ZNF586-204ENST00000598183 603 ntTSL 5 BASIC21.85■■□□□ 1.09
SHANK2Q9UPX8 PRMT5-AS1-206ENST00000599580 847 ntTSL 5 BASIC21.85■■□□□ 1.09
SHANK2Q9UPX8 AC084781.1-201ENST00000613737 656 ntBASIC21.85■■□□□ 1.09
SHANK2Q9UPX8 AC090386.2-201ENST00000623010 1039 ntBASIC21.85■■□□□ 1.09
SHANK2Q9UPX8 AC148477.9-201ENST00000623974 539 ntBASIC21.85■■□□□ 1.09
SHANK2Q9UPX8 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
SHANK2Q9UPX8 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
SHANK2Q9UPX8 LINC00470-210ENST00000584090 1334 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
SHANK2Q9UPX8 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
SHANK2Q9UPX8 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
SHANK2Q9UPX8 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC21.85■■□□□ 1.09
SHANK2Q9UPX8 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
SHANK2Q9UPX8 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
SHANK2Q9UPX8 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
SHANK2Q9UPX8 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC21.85■■□□□ 1.09
SHANK2Q9UPX8 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
SHANK2Q9UPX8 C2orf70-201ENST00000329615 731 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
SHANK2Q9UPX8 AL139125.1-201ENST00000420395 557 ntTSL 3 BASIC21.84■■□□□ 1.09
SHANK2Q9UPX8 IDS-203ENST00000428056 1213 ntTSL 2 BASIC21.84■■□□□ 1.09
SHANK2Q9UPX8 AL139420.2-201ENST00000449439 410 ntTSL 3 BASIC21.84■■□□□ 1.09
SHANK2Q9UPX8 MRPL22P1-201ENST00000505398 616 ntBASIC21.84■■□□□ 1.09
SHANK2Q9UPX8 ORAOV1-209ENST00000538554 1000 ntTSL 2 BASIC21.84■■□□□ 1.09
SHANK2Q9UPX8 AC092139.2-201ENST00000563750 754 ntTSL 3 BASIC21.84■■□□□ 1.09
SHANK2Q9UPX8 AC068025.1-201ENST00000577218 762 ntTSL 3 BASIC21.84■■□□□ 1.09
SHANK2Q9UPX8 AC018755.3-203ENST00000597710 411 ntTSL 3 BASIC21.84■■□□□ 1.09
SHANK2Q9UPX8 ZNF350-AS1-202ENST00000600253 577 ntTSL 4 BASIC21.84■■□□□ 1.09
SHANK2Q9UPX8 AC127024.7-201ENST00000625101 200 ntBASIC21.84■■□□□ 1.09
SHANK2Q9UPX8 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC21.84■■□□□ 1.09
SHANK2Q9UPX8 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
SHANK2Q9UPX8 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
SHANK2Q9UPX8 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
SHANK2Q9UPX8 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
SHANK2Q9UPX8 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC21.84■■□□□ 1.09
SHANK2Q9UPX8 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
SHANK2Q9UPX8 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC21.84■■□□□ 1.09
SHANK2Q9UPX8 SPAG8-209ENST00000484764 1618 ntAPPRIS ALT2 TSL 5 BASIC21.84■■□□□ 1.09
SHANK2Q9UPX8 TMEM144-209ENST00000509278 1633 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
SHANK2Q9UPX8 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
SHANK2Q9UPX8 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
SHANK2Q9UPX8 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC21.84■■□□□ 1.09
SHANK2Q9UPX8 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
SHANK2Q9UPX8 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
SHANK2Q9UPX8 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC21.84■■□□□ 1.09
SHANK2Q9UPX8 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
SHANK2Q9UPX8 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
SHANK2Q9UPX8 FERD3L-201ENST00000275461 640 ntAPPRIS P1 BASIC21.83■■□□□ 1.09
SHANK2Q9UPX8 U2AF1L4-201ENST00000292879 729 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
SHANK2Q9UPX8 IGF2-201ENST00000381389 1023 ntAPPRIS P2 TSL 1 (best) BASIC21.83■■□□□ 1.09
SHANK2Q9UPX8 PSMA1-202ENST00000418988 1266 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
SHANK2Q9UPX8 AL589843.1-201ENST00000423924 425 ntTSL 2 BASIC21.83■■□□□ 1.09
SHANK2Q9UPX8 CCDC18-AS1-219ENST00000451302 1212 ntTSL 3 BASIC21.83■■□□□ 1.09
SHANK2Q9UPX8 ALG1L13P-204ENST00000523017 765 ntTSL 5 BASIC21.83■■□□□ 1.09
SHANK2Q9UPX8 TMEM231-206ENST00000565067 1078 ntTSL 5 BASIC21.83■■□□□ 1.09
SHANK2Q9UPX8 AC005696.1-201ENST00000572876 443 ntTSL 2 BASIC21.83■■□□□ 1.09
SHANK2Q9UPX8 AC103810.10-201ENST00000606504 343 ntBASIC21.83■■□□□ 1.09
SHANK2Q9UPX8 LINC01746-201ENST00000621390 449 ntTSL 3 BASIC21.83■■□□□ 1.09
SHANK2Q9UPX8 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
SHANK2Q9UPX8 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 60.2 ms