Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC17.93■□□□□ 0.46
CLIP2Q9UDT6 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CLIP2Q9UDT6 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CLIP2Q9UDT6 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC17.93■□□□□ 0.46
CLIP2Q9UDT6 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
CLIP2Q9UDT6 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
CLIP2Q9UDT6 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
CLIP2Q9UDT6 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC17.93■□□□□ 0.46
CLIP2Q9UDT6 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CLIP2Q9UDT6 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC17.93■□□□□ 0.46
CLIP2Q9UDT6 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CLIP2Q9UDT6 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
CLIP2Q9UDT6 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC17.93■□□□□ 0.46
CLIP2Q9UDT6 FOS-202ENST00000535987 1402 ntTSL 2 BASIC17.93■□□□□ 0.46
CLIP2Q9UDT6 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CLIP2Q9UDT6 RPS15-201ENST00000233609 534 ntTSL 2 BASIC17.93■□□□□ 0.46
CLIP2Q9UDT6 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CLIP2Q9UDT6 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CLIP2Q9UDT6 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
CLIP2Q9UDT6 GUK1-206ENST00000366723 845 ntTSL 5 BASIC17.93■□□□□ 0.46
CLIP2Q9UDT6 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CLIP2Q9UDT6 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CLIP2Q9UDT6 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC17.93■□□□□ 0.46
CLIP2Q9UDT6 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CLIP2Q9UDT6 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC17.93■□□□□ 0.46
CLIP2Q9UDT6 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
CLIP2Q9UDT6 RNA5SP412-201ENST00000516234 123 ntBASIC17.93■□□□□ 0.46
CLIP2Q9UDT6 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC17.93■□□□□ 0.46
CLIP2Q9UDT6 RPS15-205ENST00000586686 562 ntTSL 5 BASIC17.93■□□□□ 0.46
CLIP2Q9UDT6 RPS15-208ENST00000591804 711 ntTSL 5 BASIC17.93■□□□□ 0.46
CLIP2Q9UDT6 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
CLIP2Q9UDT6 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC17.93■□□□□ 0.46
CLIP2Q9UDT6 ETV2-208ENST00000621247 941 ntTSL 5 BASIC17.93■□□□□ 0.46
CLIP2Q9UDT6 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
CLIP2Q9UDT6 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
CLIP2Q9UDT6 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC17.93■□□□□ 0.46
CLIP2Q9UDT6 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC17.93■□□□□ 0.46
CLIP2Q9UDT6 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
CLIP2Q9UDT6 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC17.93■□□□□ 0.46
CLIP2Q9UDT6 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CLIP2Q9UDT6 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC17.93■□□□□ 0.46
CLIP2Q9UDT6 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CLIP2Q9UDT6 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC17.93■□□□□ 0.46
CLIP2Q9UDT6 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CLIP2Q9UDT6 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC17.93■□□□□ 0.46
CLIP2Q9UDT6 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC17.93■□□□□ 0.46
CLIP2Q9UDT6 LRRC59-203ENST00000576448 1531 ntBASIC17.93■□□□□ 0.46
CLIP2Q9UDT6 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CLIP2Q9UDT6 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
CLIP2Q9UDT6 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CLIP2Q9UDT6 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CLIP2Q9UDT6 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC17.92■□□□□ 0.46
CLIP2Q9UDT6 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC17.92■□□□□ 0.46
CLIP2Q9UDT6 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC17.92■□□□□ 0.46
CLIP2Q9UDT6 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
CLIP2Q9UDT6 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CLIP2Q9UDT6 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CLIP2Q9UDT6 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CLIP2Q9UDT6 AC112693.3-201ENST00000624819 1983 ntBASIC17.92■□□□□ 0.46
CLIP2Q9UDT6 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
CLIP2Q9UDT6 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CLIP2Q9UDT6 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CLIP2Q9UDT6 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CLIP2Q9UDT6 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC17.92■□□□□ 0.46
CLIP2Q9UDT6 AC006001.1-201ENST00000325130 474 ntBASIC17.92■□□□□ 0.46
CLIP2Q9UDT6 RPF1-202ENST00000370656 724 ntTSL 2 BASIC17.92■□□□□ 0.46
CLIP2Q9UDT6 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CLIP2Q9UDT6 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CLIP2Q9UDT6 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CLIP2Q9UDT6 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC17.92■□□□□ 0.46
CLIP2Q9UDT6 FAM21FP-201ENST00000426241 1131 ntBASIC17.92■□□□□ 0.46
CLIP2Q9UDT6 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC17.92■□□□□ 0.46
CLIP2Q9UDT6 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC17.92■□□□□ 0.46
CLIP2Q9UDT6 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC17.92■□□□□ 0.46
CLIP2Q9UDT6 AHRR-211ENST00000515206 462 ntTSL 5 BASIC17.92■□□□□ 0.46
CLIP2Q9UDT6 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
CLIP2Q9UDT6 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC17.92■□□□□ 0.46
CLIP2Q9UDT6 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC17.92■□□□□ 0.46
CLIP2Q9UDT6 AC079316.1-201ENST00000548397 411 ntBASIC17.92■□□□□ 0.46
CLIP2Q9UDT6 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC17.92■□□□□ 0.46
CLIP2Q9UDT6 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CLIP2Q9UDT6 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CLIP2Q9UDT6 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CLIP2Q9UDT6 AC005089.1-201ENST00000619486 2241 ntBASIC17.92■□□□□ 0.46
CLIP2Q9UDT6 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
CLIP2Q9UDT6 CELP-203ENST00000624767 2414 ntTSL 5 BASIC17.92■□□□□ 0.46
CLIP2Q9UDT6 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CLIP2Q9UDT6 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
CLIP2Q9UDT6 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CLIP2Q9UDT6 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC17.92■□□□□ 0.46
CLIP2Q9UDT6 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CLIP2Q9UDT6 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CLIP2Q9UDT6 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
CLIP2Q9UDT6 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
CLIP2Q9UDT6 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC17.91■□□□□ 0.46
CLIP2Q9UDT6 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
CLIP2Q9UDT6 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
CLIP2Q9UDT6 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CLIP2Q9UDT6 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC17.91■□□□□ 0.46
CLIP2Q9UDT6 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms