Protein–RNA interactions for Protein: Q9UBX1

CTSF, Cathepsin F, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSFQ9UBX1 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CTSFQ9UBX1 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CTSFQ9UBX1 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC14.22□□□□□ -0.13
CTSFQ9UBX1 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CTSFQ9UBX1 AC092384.3-202ENST00000564646 2873 ntBASIC14.22□□□□□ -0.13
CTSFQ9UBX1 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CTSFQ9UBX1 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
CTSFQ9UBX1 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC14.22□□□□□ -0.13
CTSFQ9UBX1 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CTSFQ9UBX1 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CTSFQ9UBX1 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CTSFQ9UBX1 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
CTSFQ9UBX1 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC14.22□□□□□ -0.13
CTSFQ9UBX1 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
CTSFQ9UBX1 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
CTSFQ9UBX1 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC14.22□□□□□ -0.13
CTSFQ9UBX1 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC14.22□□□□□ -0.13
CTSFQ9UBX1 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC14.22□□□□□ -0.13
CTSFQ9UBX1 GOLGA2P4-201ENST00000441462 777 ntBASIC14.22□□□□□ -0.13
CTSFQ9UBX1 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CTSFQ9UBX1 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CTSFQ9UBX1 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC14.22□□□□□ -0.13
CTSFQ9UBX1 AL391280.1-201ENST00000506969 1062 ntBASIC14.22□□□□□ -0.13
CTSFQ9UBX1 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CTSFQ9UBX1 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CTSFQ9UBX1 AP003171.2-201ENST00000528208 925 ntBASIC14.22□□□□□ -0.13
CTSFQ9UBX1 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC14.22□□□□□ -0.13
CTSFQ9UBX1 C2orf69P2-201ENST00000562032 1123 ntBASIC14.22□□□□□ -0.13
CTSFQ9UBX1 EEF1DP1-201ENST00000585891 896 ntBASIC14.22□□□□□ -0.13
CTSFQ9UBX1 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC14.22□□□□□ -0.13
CTSFQ9UBX1 AC091271.1-201ENST00000611877 1162 ntBASIC14.22□□□□□ -0.13
CTSFQ9UBX1 MIR6869-201ENST00000619434 62 ntBASIC14.22□□□□□ -0.13
CTSFQ9UBX1 AC138466.3-201ENST00000619983 221 ntBASIC14.22□□□□□ -0.13
CTSFQ9UBX1 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CTSFQ9UBX1 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CTSFQ9UBX1 REXO1L2P-201ENST00000425429 2069 ntBASIC14.22□□□□□ -0.13
CTSFQ9UBX1 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CTSFQ9UBX1 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC14.22□□□□□ -0.13
CTSFQ9UBX1 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC14.22□□□□□ -0.13
CTSFQ9UBX1 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC14.22□□□□□ -0.13
CTSFQ9UBX1 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC14.22□□□□□ -0.13
CTSFQ9UBX1 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
CTSFQ9UBX1 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC14.22□□□□□ -0.13
CTSFQ9UBX1 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CTSFQ9UBX1 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CTSFQ9UBX1 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CTSFQ9UBX1 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC14.22□□□□□ -0.13
CTSFQ9UBX1 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CTSFQ9UBX1 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC14.21□□□□□ -0.13
CTSFQ9UBX1 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CTSFQ9UBX1 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
CTSFQ9UBX1 AC138035.3-201ENST00000622706 2791 ntBASIC14.21□□□□□ -0.13
CTSFQ9UBX1 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
CTSFQ9UBX1 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CTSFQ9UBX1 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
CTSFQ9UBX1 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC14.21□□□□□ -0.13
CTSFQ9UBX1 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CTSFQ9UBX1 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CTSFQ9UBX1 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC14.21□□□□□ -0.13
CTSFQ9UBX1 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
CTSFQ9UBX1 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC14.21□□□□□ -0.13
CTSFQ9UBX1 HOMER2P2-201ENST00000451621 847 ntBASIC14.21□□□□□ -0.13
CTSFQ9UBX1 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CTSFQ9UBX1 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC14.21□□□□□ -0.13
CTSFQ9UBX1 AC106820.3-201ENST00000561653 397 ntBASIC14.21□□□□□ -0.13
CTSFQ9UBX1 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC14.21□□□□□ -0.13
CTSFQ9UBX1 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC14.21□□□□□ -0.13
CTSFQ9UBX1 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
CTSFQ9UBX1 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC14.21□□□□□ -0.13
CTSFQ9UBX1 AC073413.1-201ENST00000603927 732 ntBASIC14.21□□□□□ -0.13
CTSFQ9UBX1 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC14.21□□□□□ -0.13
CTSFQ9UBX1 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
CTSFQ9UBX1 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
CTSFQ9UBX1 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
CTSFQ9UBX1 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
CTSFQ9UBX1 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.14
CTSFQ9UBX1 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
CTSFQ9UBX1 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
CTSFQ9UBX1 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
CTSFQ9UBX1 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.14
CTSFQ9UBX1 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC14.21□□□□□ -0.14
CTSFQ9UBX1 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CTSFQ9UBX1 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
CTSFQ9UBX1 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
CTSFQ9UBX1 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CTSFQ9UBX1 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CTSFQ9UBX1 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC14.2□□□□□ -0.14
CTSFQ9UBX1 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC14.2□□□□□ -0.14
CTSFQ9UBX1 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC14.2□□□□□ -0.14
CTSFQ9UBX1 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CTSFQ9UBX1 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC14.2□□□□□ -0.14
CTSFQ9UBX1 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC14.2□□□□□ -0.14
CTSFQ9UBX1 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC14.2□□□□□ -0.14
CTSFQ9UBX1 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CTSFQ9UBX1 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CTSFQ9UBX1 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
CTSFQ9UBX1 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
CTSFQ9UBX1 BANP-203ENST00000393207 2438 ntTSL 2 BASIC14.2□□□□□ -0.14
CTSFQ9UBX1 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC14.2□□□□□ -0.14
CTSFQ9UBX1 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC14.2□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 67.3 ms