Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CUEDC1Q9NWM3 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CUEDC1Q9NWM3 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CUEDC1Q9NWM3 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CUEDC1Q9NWM3 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CUEDC1Q9NWM3 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC14.67□□□□□ -0.06
CUEDC1Q9NWM3 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
CUEDC1Q9NWM3 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CUEDC1Q9NWM3 BCYRN1-201ENST00000418539 200 ntBASIC14.67□□□□□ -0.06
CUEDC1Q9NWM3 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC14.67□□□□□ -0.06
CUEDC1Q9NWM3 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC14.67□□□□□ -0.06
CUEDC1Q9NWM3 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CUEDC1Q9NWM3 AC022137.2-201ENST00000503482 481 ntBASIC14.67□□□□□ -0.06
CUEDC1Q9NWM3 AC119751.2-201ENST00000504529 210 ntBASIC14.67□□□□□ -0.06
CUEDC1Q9NWM3 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC14.67□□□□□ -0.06
CUEDC1Q9NWM3 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC14.67□□□□□ -0.06
CUEDC1Q9NWM3 ORC6-206ENST00000568364 888 ntTSL 5 BASIC14.67□□□□□ -0.06
CUEDC1Q9NWM3 AC009486.1-201ENST00000569860 813 ntBASIC14.67□□□□□ -0.06
CUEDC1Q9NWM3 KSR1-207ENST00000578981 748 ntTSL 4 BASIC14.67□□□□□ -0.06
CUEDC1Q9NWM3 MIR4259-201ENST00000584466 101 ntBASIC14.67□□□□□ -0.06
CUEDC1Q9NWM3 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC14.67□□□□□ -0.06
CUEDC1Q9NWM3 AP005019.2-201ENST00000615104 511 ntBASIC14.67□□□□□ -0.06
CUEDC1Q9NWM3 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
CUEDC1Q9NWM3 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
CUEDC1Q9NWM3 LILRP1-201ENST00000444199 1370 ntBASIC14.67□□□□□ -0.06
CUEDC1Q9NWM3 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC14.67□□□□□ -0.06
CUEDC1Q9NWM3 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CUEDC1Q9NWM3 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CUEDC1Q9NWM3 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
CUEDC1Q9NWM3 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
CUEDC1Q9NWM3 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CUEDC1Q9NWM3 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC14.67□□□□□ -0.06
CUEDC1Q9NWM3 AC006058.4-201ENST00000624016 1670 ntBASIC14.67□□□□□ -0.06
CUEDC1Q9NWM3 AL137783.1-201ENST00000623494 1896 ntBASIC14.67□□□□□ -0.06
CUEDC1Q9NWM3 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
CUEDC1Q9NWM3 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CUEDC1Q9NWM3 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CUEDC1Q9NWM3 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC14.67□□□□□ -0.06
CUEDC1Q9NWM3 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CUEDC1Q9NWM3 KRT8P14-201ENST00000414254 1442 ntBASIC14.66□□□□□ -0.06
CUEDC1Q9NWM3 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC14.66□□□□□ -0.06
CUEDC1Q9NWM3 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC14.66□□□□□ -0.06
CUEDC1Q9NWM3 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
CUEDC1Q9NWM3 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CUEDC1Q9NWM3 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CUEDC1Q9NWM3 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CUEDC1Q9NWM3 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC14.66□□□□□ -0.06
CUEDC1Q9NWM3 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CUEDC1Q9NWM3 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CUEDC1Q9NWM3 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CUEDC1Q9NWM3 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC14.66□□□□□ -0.06
CUEDC1Q9NWM3 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC14.66□□□□□ -0.06
CUEDC1Q9NWM3 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC14.66□□□□□ -0.06
CUEDC1Q9NWM3 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CUEDC1Q9NWM3 AJ011931.1-201ENST00000618749 2492 ntBASIC14.66□□□□□ -0.06
CUEDC1Q9NWM3 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
CUEDC1Q9NWM3 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CUEDC1Q9NWM3 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CUEDC1Q9NWM3 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC14.66□□□□□ -0.06
CUEDC1Q9NWM3 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
CUEDC1Q9NWM3 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CUEDC1Q9NWM3 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CUEDC1Q9NWM3 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CUEDC1Q9NWM3 ACKR1-201ENST00000368121 1240 ntBASIC14.66□□□□□ -0.06
CUEDC1Q9NWM3 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC14.66□□□□□ -0.06
CUEDC1Q9NWM3 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CUEDC1Q9NWM3 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC14.66□□□□□ -0.06
CUEDC1Q9NWM3 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
CUEDC1Q9NWM3 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CUEDC1Q9NWM3 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC14.66□□□□□ -0.06
CUEDC1Q9NWM3 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC14.66□□□□□ -0.06
CUEDC1Q9NWM3 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
CUEDC1Q9NWM3 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CUEDC1Q9NWM3 AC068587.3-201ENST00000526613 355 ntBASIC14.66□□□□□ -0.06
CUEDC1Q9NWM3 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
CUEDC1Q9NWM3 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC14.66□□□□□ -0.06
CUEDC1Q9NWM3 PTP4A1P2-201ENST00000546033 454 ntBASIC14.66□□□□□ -0.06
CUEDC1Q9NWM3 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
CUEDC1Q9NWM3 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CUEDC1Q9NWM3 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC14.66□□□□□ -0.06
CUEDC1Q9NWM3 AC015936.2-201ENST00000593177 259 ntBASIC14.66□□□□□ -0.06
CUEDC1Q9NWM3 AC008735.3-201ENST00000596646 500 ntBASIC14.66□□□□□ -0.06
CUEDC1Q9NWM3 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC14.66□□□□□ -0.06
CUEDC1Q9NWM3 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC14.66□□□□□ -0.06
CUEDC1Q9NWM3 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CUEDC1Q9NWM3 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CUEDC1Q9NWM3 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
CUEDC1Q9NWM3 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
CUEDC1Q9NWM3 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CUEDC1Q9NWM3 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC14.66□□□□□ -0.06
CUEDC1Q9NWM3 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC14.66□□□□□ -0.06
CUEDC1Q9NWM3 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CUEDC1Q9NWM3 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CUEDC1Q9NWM3 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CUEDC1Q9NWM3 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CUEDC1Q9NWM3 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CUEDC1Q9NWM3 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
CUEDC1Q9NWM3 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CUEDC1Q9NWM3 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
CUEDC1Q9NWM3 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC14.66□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms