Protein–RNA interactions for Protein: Q9BYB0

SHANK3, SH3 and multiple ankyrin repeat domains protein 3, humanhuman

Predictions only

Length 1,731 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3Q9BYB0 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
SHANK3Q9BYB0 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SHANK3Q9BYB0 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SHANK3Q9BYB0 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.62
SHANK3Q9BYB0 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.62
SHANK3Q9BYB0 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
SHANK3Q9BYB0 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
SHANK3Q9BYB0 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC18.89■□□□□ 0.62
SHANK3Q9BYB0 CNBP-201ENST00000422453 1664 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
SHANK3Q9BYB0 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC18.89■□□□□ 0.61
SHANK3Q9BYB0 NHP2-202ENST00000314397 599 ntTSL 2 BASIC18.89■□□□□ 0.61
SHANK3Q9BYB0 S100A3-202ENST00000368713 856 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SHANK3Q9BYB0 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SHANK3Q9BYB0 LTF-202ENST00000417439 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
SHANK3Q9BYB0 AC091564.6-201ENST00000526633 487 ntTSL 3 BASIC18.89■□□□□ 0.61
SHANK3Q9BYB0 KLF17P1-201ENST00000547105 1126 ntBASIC18.89■□□□□ 0.61
SHANK3Q9BYB0 LINC01500-204ENST00000556815 752 ntTSL 3 BASIC18.89■□□□□ 0.61
SHANK3Q9BYB0 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
SHANK3Q9BYB0 COLCA2-202ENST00000526216 1332 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SHANK3Q9BYB0 AC067931.2-201ENST00000623655 2003 ntBASIC18.89■□□□□ 0.61
SHANK3Q9BYB0 TRMT10B-207ENST00000537911 2108 ntTSL 2 BASIC18.89■□□□□ 0.61
SHANK3Q9BYB0 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SHANK3Q9BYB0 UBL4B-201ENST00000334179 1478 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
SHANK3Q9BYB0 ZNF576-202ENST00000391965 1468 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
SHANK3Q9BYB0 RBP1-205ENST00000492918 1487 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SHANK3Q9BYB0 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SHANK3Q9BYB0 PGAP2-227ENST00000496834 1530 ntTSL 2 BASIC18.88■□□□□ 0.61
SHANK3Q9BYB0 COX20P1-201ENST00000366529 357 ntBASIC18.88■□□□□ 0.61
SHANK3Q9BYB0 MAPK13-202ENST00000373759 1036 ntTSL 5 BASIC18.88■□□□□ 0.61
SHANK3Q9BYB0 CHTF8-202ENST00000398235 1073 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
SHANK3Q9BYB0 RBM14-204ENST00000409738 372 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SHANK3Q9BYB0 NSD2-209ENST00000436793 835 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SHANK3Q9BYB0 AC069208.1-205ENST00000456299 576 ntTSL 4 BASIC18.88■□□□□ 0.61
SHANK3Q9BYB0 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC18.88■□□□□ 0.61
SHANK3Q9BYB0 MIR4472-1-201ENST00000584349 80 ntBASIC18.88■□□□□ 0.61
SHANK3Q9BYB0 AC011247.3-201ENST00000603297 438 ntBASIC18.88■□□□□ 0.61
SHANK3Q9BYB0 AL121956.4-201ENST00000629925 581 ntTSL 5 BASIC18.88■□□□□ 0.61
SHANK3Q9BYB0 AC233280.19-201ENST00000633223 136 ntBASIC18.88■□□□□ 0.61
SHANK3Q9BYB0 AGGF1P1-201ENST00000509500 2073 ntBASIC18.88■□□□□ 0.61
SHANK3Q9BYB0 RARS2-201ENST00000369536 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SHANK3Q9BYB0 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SHANK3Q9BYB0 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SHANK3Q9BYB0 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SHANK3Q9BYB0 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
SHANK3Q9BYB0 AL591122.2-201ENST00000624125 1853 ntBASIC18.88■□□□□ 0.61
SHANK3Q9BYB0 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SHANK3Q9BYB0 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SHANK3Q9BYB0 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
SHANK3Q9BYB0 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC18.88■□□□□ 0.61
SHANK3Q9BYB0 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SHANK3Q9BYB0 MRGPRX4-201ENST00000314254 1444 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
SHANK3Q9BYB0 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SHANK3Q9BYB0 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SHANK3Q9BYB0 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC18.88■□□□□ 0.61
SHANK3Q9BYB0 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
SHANK3Q9BYB0 VEGFA-201ENST00000230480 993 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SHANK3Q9BYB0 TMSB15A-201ENST00000289373 685 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SHANK3Q9BYB0 SPATA8-201ENST00000328504 1083 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
SHANK3Q9BYB0 PPIA-201ENST00000355968 818 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SHANK3Q9BYB0 Z69890.1-201ENST00000382990 339 ntBASIC18.88■□□□□ 0.61
SHANK3Q9BYB0 BRI3P1-201ENST00000440440 378 ntBASIC18.88■□□□□ 0.61
SHANK3Q9BYB0 PPIA-208ENST00000489459 907 ntTSL 2 BASIC18.88■□□□□ 0.61
SHANK3Q9BYB0 RN7SL564P-201ENST00000496309 250 ntBASIC18.88■□□□□ 0.61
SHANK3Q9BYB0 AC105219.2-201ENST00000527908 299 ntTSL 4 BASIC18.88■□□□□ 0.61
SHANK3Q9BYB0 NME1-NME2-203ENST00000555572 1193 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
SHANK3Q9BYB0 AC140113.1-201ENST00000603467 169 ntBASIC18.88■□□□□ 0.61
SHANK3Q9BYB0 PPIA-210ENST00000620047 827 ntTSL 5 BASIC18.88■□□□□ 0.61
SHANK3Q9BYB0 AL138720.1-201ENST00000629853 778 ntTSL 5 BASIC18.88■□□□□ 0.61
SHANK3Q9BYB0 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
SHANK3Q9BYB0 SCAF11-203ENST00000395453 1336 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
SHANK3Q9BYB0 SF1-209ENST00000433274 2317 ntTSL 2 BASIC18.88■□□□□ 0.61
SHANK3Q9BYB0 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC18.88■□□□□ 0.61
SHANK3Q9BYB0 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SHANK3Q9BYB0 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SHANK3Q9BYB0 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SHANK3Q9BYB0 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC18.87■□□□□ 0.61
SHANK3Q9BYB0 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC18.87■□□□□ 0.61
SHANK3Q9BYB0 CRYGC-201ENST00000282141 629 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SHANK3Q9BYB0 LCE3B-201ENST00000335633 288 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
SHANK3Q9BYB0 LINC02557-201ENST00000432249 477 ntTSL 3 BASIC18.87■□□□□ 0.61
SHANK3Q9BYB0 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
SHANK3Q9BYB0 RN7SL530P-201ENST00000485097 298 ntBASIC18.87■□□□□ 0.61
SHANK3Q9BYB0 WDYHV1-206ENST00000523356 869 ntTSL 3 BASIC18.87■□□□□ 0.61
SHANK3Q9BYB0 AC010504.1-201ENST00000591311 585 ntTSL 3 BASIC18.87■□□□□ 0.61
SHANK3Q9BYB0 AL133467.4-201ENST00000602953 725 ntBASIC18.87■□□□□ 0.61
SHANK3Q9BYB0 MYOZ3-209ENST00000615557 1031 ntTSL 2 BASIC18.87■□□□□ 0.61
SHANK3Q9BYB0 MME-218ENST00000625667 363 ntTSL 5 BASIC18.87■□□□□ 0.61
SHANK3Q9BYB0 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC18.87■□□□□ 0.61
SHANK3Q9BYB0 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SHANK3Q9BYB0 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
SHANK3Q9BYB0 SARS2-202ENST00000430193 1886 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
SHANK3Q9BYB0 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
SHANK3Q9BYB0 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
SHANK3Q9BYB0 Z84468.1-201ENST00000626321 1408 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
SHANK3Q9BYB0 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SHANK3Q9BYB0 KCTD6-202ENST00000404589 1533 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
SHANK3Q9BYB0 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SHANK3Q9BYB0 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SHANK3Q9BYB0 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SHANK3Q9BYB0 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 73.3 ms