Protein–RNA interactions for Protein: Q9BWF2

TRAIP, E3 ubiquitin-protein ligase TRAIP, humanhuman

Predictions only

Length 469 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIPQ9BWF2 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC16.56■□□□□ 0.24
TRAIPQ9BWF2 MIR4741-201ENST00000579822 90 ntBASIC16.56■□□□□ 0.24
TRAIPQ9BWF2 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
TRAIPQ9BWF2 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TRAIPQ9BWF2 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRAIPQ9BWF2 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRAIPQ9BWF2 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
TRAIPQ9BWF2 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
TRAIPQ9BWF2 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC16.56■□□□□ 0.24
TRAIPQ9BWF2 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRAIPQ9BWF2 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC16.56■□□□□ 0.24
TRAIPQ9BWF2 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
TRAIPQ9BWF2 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TRAIPQ9BWF2 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC16.56■□□□□ 0.24
TRAIPQ9BWF2 ANKRD30BP2-201ENST00000435744 1610 ntBASIC16.56■□□□□ 0.24
TRAIPQ9BWF2 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRAIPQ9BWF2 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC16.55■□□□□ 0.24
TRAIPQ9BWF2 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRAIPQ9BWF2 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRAIPQ9BWF2 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
TRAIPQ9BWF2 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRAIPQ9BWF2 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRAIPQ9BWF2 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC16.55■□□□□ 0.24
TRAIPQ9BWF2 ZBTB45P1-201ENST00000452761 1456 ntBASIC16.55■□□□□ 0.24
TRAIPQ9BWF2 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRAIPQ9BWF2 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TRAIPQ9BWF2 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC16.55■□□□□ 0.24
TRAIPQ9BWF2 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC16.55■□□□□ 0.24
TRAIPQ9BWF2 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC16.55■□□□□ 0.24
TRAIPQ9BWF2 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TRAIPQ9BWF2 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRAIPQ9BWF2 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRAIPQ9BWF2 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC16.55■□□□□ 0.24
TRAIPQ9BWF2 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRAIPQ9BWF2 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TRAIPQ9BWF2 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC16.55■□□□□ 0.24
TRAIPQ9BWF2 GHSR-202ENST00000427970 912 ntBASIC16.55■□□□□ 0.24
TRAIPQ9BWF2 FAM8A4P-201ENST00000435433 1213 ntBASIC16.55■□□□□ 0.24
TRAIPQ9BWF2 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC16.55■□□□□ 0.24
TRAIPQ9BWF2 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TRAIPQ9BWF2 APOA2-204ENST00000464492 530 ntTSL 3 BASIC16.55■□□□□ 0.24
TRAIPQ9BWF2 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC16.55■□□□□ 0.24
TRAIPQ9BWF2 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC16.55■□□□□ 0.24
TRAIPQ9BWF2 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC16.55■□□□□ 0.24
TRAIPQ9BWF2 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRAIPQ9BWF2 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC16.55■□□□□ 0.24
TRAIPQ9BWF2 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC16.55■□□□□ 0.24
TRAIPQ9BWF2 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC16.55■□□□□ 0.24
TRAIPQ9BWF2 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRAIPQ9BWF2 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRAIPQ9BWF2 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TRAIPQ9BWF2 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRAIPQ9BWF2 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRAIPQ9BWF2 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC16.55■□□□□ 0.24
TRAIPQ9BWF2 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRAIPQ9BWF2 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
TRAIPQ9BWF2 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRAIPQ9BWF2 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRAIPQ9BWF2 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
TRAIPQ9BWF2 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRAIPQ9BWF2 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRAIPQ9BWF2 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRAIPQ9BWF2 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRAIPQ9BWF2 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRAIPQ9BWF2 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRAIPQ9BWF2 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRAIPQ9BWF2 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRAIPQ9BWF2 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRAIPQ9BWF2 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRAIPQ9BWF2 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TRAIPQ9BWF2 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRAIPQ9BWF2 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRAIPQ9BWF2 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC16.54■□□□□ 0.24
TRAIPQ9BWF2 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC16.54■□□□□ 0.24
TRAIPQ9BWF2 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC16.54■□□□□ 0.24
TRAIPQ9BWF2 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC16.54■□□□□ 0.24
TRAIPQ9BWF2 MTX1P1-201ENST00000440904 838 ntBASIC16.54■□□□□ 0.24
TRAIPQ9BWF2 AC004898.1-201ENST00000451057 766 ntBASIC16.54■□□□□ 0.24
TRAIPQ9BWF2 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TRAIPQ9BWF2 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
TRAIPQ9BWF2 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC16.54■□□□□ 0.24
TRAIPQ9BWF2 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC16.54■□□□□ 0.24
TRAIPQ9BWF2 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
TRAIPQ9BWF2 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC16.54■□□□□ 0.24
TRAIPQ9BWF2 AL022328.3-201ENST00000607943 679 ntBASIC16.54■□□□□ 0.24
TRAIPQ9BWF2 AC005695.3-201ENST00000614522 232 ntBASIC16.54■□□□□ 0.24
TRAIPQ9BWF2 AL008638.5-201ENST00000623814 1298 ntBASIC16.54■□□□□ 0.24
TRAIPQ9BWF2 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TRAIPQ9BWF2 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
TRAIPQ9BWF2 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRAIPQ9BWF2 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRAIPQ9BWF2 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC16.54■□□□□ 0.24
TRAIPQ9BWF2 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC16.54■□□□□ 0.24
TRAIPQ9BWF2 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRAIPQ9BWF2 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
TRAIPQ9BWF2 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRAIPQ9BWF2 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TRAIPQ9BWF2 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRAIPQ9BWF2 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRAIPQ9BWF2 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC16.53■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms