Protein–RNA interactions for Protein: Q99684

GFI1, Zinc finger protein Gfi-1, humanhuman

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFI1Q99684 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC13.01□□□□□ -0.33
GFI1Q99684 RPL30-202ENST00000396070 440 ntTSL 2 BASIC13.01□□□□□ -0.33
GFI1Q99684 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC13.01□□□□□ -0.33
GFI1Q99684 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC13.01□□□□□ -0.33
GFI1Q99684 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC13.01□□□□□ -0.33
GFI1Q99684 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC13.01□□□□□ -0.33
GFI1Q99684 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
GFI1Q99684 AC051619.7-201ENST00000568314 623 ntBASIC13.01□□□□□ -0.33
GFI1Q99684 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC13.01□□□□□ -0.33
GFI1Q99684 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC13.01□□□□□ -0.33
GFI1Q99684 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC13.01□□□□□ -0.33
GFI1Q99684 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
GFI1Q99684 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
GFI1Q99684 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
GFI1Q99684 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
GFI1Q99684 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC13.01□□□□□ -0.33
GFI1Q99684 RGS8-204ENST00000483095 1432 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
GFI1Q99684 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
GFI1Q99684 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC13.01□□□□□ -0.33
GFI1Q99684 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC13.01□□□□□ -0.33
GFI1Q99684 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
GFI1Q99684 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
GFI1Q99684 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
GFI1Q99684 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC13.01□□□□□ -0.33
GFI1Q99684 C7orf57-204ENST00000435376 1925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
GFI1Q99684 C7orf57-206ENST00000539619 1927 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
GFI1Q99684 CPA5-205ENST00000466363 2099 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
GFI1Q99684 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
GFI1Q99684 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC13.01□□□□□ -0.33
GFI1Q99684 RER1-207ENST00000488353 2469 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
GFI1Q99684 ATG9A-204ENST00000409422 2512 ntTSL 5 BASIC13.01□□□□□ -0.33
GFI1Q99684 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC13.01□□□□□ -0.33
GFI1Q99684 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC13.01□□□□□ -0.33
GFI1Q99684 AC068888.1-207ENST00000546793 2863 ntTSL 2 BASIC13.01□□□□□ -0.33
GFI1Q99684 DLL4-201ENST00000249749 3372 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
GFI1Q99684 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
GFI1Q99684 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
GFI1Q99684 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC13.01□□□□□ -0.33
GFI1Q99684 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
GFI1Q99684 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
GFI1Q99684 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
GFI1Q99684 AP4B1-201ENST00000256658 2742 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
GFI1Q99684 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC13□□□□□ -0.33
GFI1Q99684 ATG13-215ENST00000529655 2566 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
GFI1Q99684 AL512306.2-201ENST00000444037 2219 ntTSL 2 BASIC13□□□□□ -0.33
GFI1Q99684 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC13□□□□□ -0.33
GFI1Q99684 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
GFI1Q99684 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
GFI1Q99684 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC13□□□□□ -0.33
GFI1Q99684 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC13□□□□□ -0.33
GFI1Q99684 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
GFI1Q99684 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC13□□□□□ -0.33
GFI1Q99684 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC13□□□□□ -0.33
GFI1Q99684 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
GFI1Q99684 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC13□□□□□ -0.33
GFI1Q99684 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
GFI1Q99684 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
GFI1Q99684 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC13□□□□□ -0.33
GFI1Q99684 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
GFI1Q99684 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC13□□□□□ -0.33
GFI1Q99684 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
GFI1Q99684 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
GFI1Q99684 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
GFI1Q99684 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC13□□□□□ -0.33
GFI1Q99684 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC13□□□□□ -0.33
GFI1Q99684 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC13□□□□□ -0.33
GFI1Q99684 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC13□□□□□ -0.33
GFI1Q99684 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC13□□□□□ -0.33
GFI1Q99684 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC13□□□□□ -0.33
GFI1Q99684 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC13□□□□□ -0.33
GFI1Q99684 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC13□□□□□ -0.33
GFI1Q99684 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC13□□□□□ -0.33
GFI1Q99684 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC13□□□□□ -0.33
GFI1Q99684 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC13□□□□□ -0.33
GFI1Q99684 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC13□□□□□ -0.33
GFI1Q99684 TEX28P1-201ENST00000613479 1221 ntBASIC13□□□□□ -0.33
GFI1Q99684 TEX28P2-201ENST00000617764 1221 ntBASIC13□□□□□ -0.33
GFI1Q99684 MEFV-201ENST00000219596 3499 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
GFI1Q99684 CGB7-203ENST00000597853 3386 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
GFI1Q99684 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
GFI1Q99684 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
GFI1Q99684 LINC01750-202ENST00000438293 3068 ntTSL 1 (best) BASIC13□□□□□ -0.33
GFI1Q99684 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC13□□□□□ -0.33
GFI1Q99684 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC13□□□□□ -0.33
GFI1Q99684 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
GFI1Q99684 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
GFI1Q99684 SLC9B1-201ENST00000296422 1879 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
GFI1Q99684 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC12.99□□□□□ -0.33
GFI1Q99684 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC12.99□□□□□ -0.33
GFI1Q99684 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC12.99□□□□□ -0.33
GFI1Q99684 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
GFI1Q99684 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC12.99□□□□□ -0.33
GFI1Q99684 DAGLB-201ENST00000297056 2897 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
GFI1Q99684 METTL13-203ENST00000367737 2865 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
GFI1Q99684 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
GFI1Q99684 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
GFI1Q99684 MCRIP1-207ENST00000574190 2775 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
GFI1Q99684 FAM129B-202ENST00000373314 3760 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
GFI1Q99684 CLCNKA-202ENST00000375692 2581 ntAPPRIS ALT1 TSL 1 (best) BASIC12.99□□□□□ -0.33
GFI1Q99684 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 106.7 ms