Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 AC069120.2-201ENST00000524091 540 ntBASIC13.87□□□□□ -0.19
SNX18Q96RF0 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC13.87□□□□□ -0.19
SNX18Q96RF0 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC13.87□□□□□ -0.19
SNX18Q96RF0 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC13.87□□□□□ -0.19
SNX18Q96RF0 AC138761.1-201ENST00000584393 385 ntBASIC13.87□□□□□ -0.19
SNX18Q96RF0 UBL5-208ENST00000593087 320 ntTSL 3 BASIC13.87□□□□□ -0.19
SNX18Q96RF0 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
SNX18Q96RF0 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SNX18Q96RF0 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
SNX18Q96RF0 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
SNX18Q96RF0 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SNX18Q96RF0 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SNX18Q96RF0 CPT1B-202ENST00000360719 2319 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
SNX18Q96RF0 CPA5-205ENST00000466363 2099 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
SNX18Q96RF0 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SNX18Q96RF0 THSD4-201ENST00000261862 3133 ntTSL 5 BASIC13.87□□□□□ -0.19
SNX18Q96RF0 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC13.87□□□□□ -0.19
SNX18Q96RF0 AC092135.3-201ENST00000624151 1846 ntBASIC13.87□□□□□ -0.19
SNX18Q96RF0 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SNX18Q96RF0 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
SNX18Q96RF0 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
SNX18Q96RF0 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC13.87□□□□□ -0.19
SNX18Q96RF0 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
SNX18Q96RF0 FUBP1-203ENST00000370768 2378 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SNX18Q96RF0 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC13.87□□□□□ -0.19
SNX18Q96RF0 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC13.87□□□□□ -0.19
SNX18Q96RF0 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC13.87□□□□□ -0.19
SNX18Q96RF0 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SNX18Q96RF0 BAK1-202ENST00000374467 2136 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SNX18Q96RF0 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC13.87□□□□□ -0.19
SNX18Q96RF0 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
SNX18Q96RF0 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
SNX18Q96RF0 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC13.87□□□□□ -0.19
SNX18Q96RF0 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC13.86□□□□□ -0.19
SNX18Q96RF0 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SNX18Q96RF0 ZNF747-202ENST00000395094 3504 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
SNX18Q96RF0 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
SNX18Q96RF0 PPP6R2-204ENST00000395744 3293 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
SNX18Q96RF0 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SNX18Q96RF0 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SNX18Q96RF0 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC13.86□□□□□ -0.19
SNX18Q96RF0 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC13.86□□□□□ -0.19
SNX18Q96RF0 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
SNX18Q96RF0 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
SNX18Q96RF0 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
SNX18Q96RF0 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
SNX18Q96RF0 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC13.86□□□□□ -0.19
SNX18Q96RF0 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
SNX18Q96RF0 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SNX18Q96RF0 VMA21-202ENST00000370361 693 ntTSL 5 BASIC13.86□□□□□ -0.19
SNX18Q96RF0 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC13.86□□□□□ -0.19
SNX18Q96RF0 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SNX18Q96RF0 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
SNX18Q96RF0 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SNX18Q96RF0 COX20P2-201ENST00000452636 358 ntBASIC13.86□□□□□ -0.19
SNX18Q96RF0 AL512638.1-201ENST00000457493 794 ntBASIC13.86□□□□□ -0.19
SNX18Q96RF0 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC13.86□□□□□ -0.19
SNX18Q96RF0 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC13.86□□□□□ -0.19
SNX18Q96RF0 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC13.86□□□□□ -0.19
SNX18Q96RF0 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC13.86□□□□□ -0.19
SNX18Q96RF0 TBCB-211ENST00000589996 724 ntTSL 3 BASIC13.86□□□□□ -0.19
SNX18Q96RF0 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
SNX18Q96RF0 AC074044.1-201ENST00000609673 707 ntBASIC13.86□□□□□ -0.19
SNX18Q96RF0 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC13.86□□□□□ -0.19
SNX18Q96RF0 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC13.86□□□□□ -0.19
SNX18Q96RF0 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SNX18Q96RF0 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SNX18Q96RF0 ARRB1-202ENST00000420843 3336 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SNX18Q96RF0 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
SNX18Q96RF0 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SNX18Q96RF0 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC13.86□□□□□ -0.19
SNX18Q96RF0 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC13.86□□□□□ -0.19
SNX18Q96RF0 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
SNX18Q96RF0 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
SNX18Q96RF0 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC13.86□□□□□ -0.19
SNX18Q96RF0 CYP2AB1P-202ENST00000454440 1456 ntBASIC13.86□□□□□ -0.19
SNX18Q96RF0 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC13.86□□□□□ -0.19
SNX18Q96RF0 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC13.86□□□□□ -0.19
SNX18Q96RF0 KCP-203ENST00000610776 5108 ntTSL 5 BASIC13.85□□□□□ -0.19
SNX18Q96RF0 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
SNX18Q96RF0 SFMBT2-203ENST00000379713 2402 ntTSL 2 BASIC13.85□□□□□ -0.19
SNX18Q96RF0 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SNX18Q96RF0 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SNX18Q96RF0 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SNX18Q96RF0 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SNX18Q96RF0 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC13.85□□□□□ -0.19
SNX18Q96RF0 TRPV4-202ENST00000418703 3247 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SNX18Q96RF0 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SNX18Q96RF0 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SNX18Q96RF0 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
SNX18Q96RF0 DHX16-202ENST00000376442 3445 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SNX18Q96RF0 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC13.85□□□□□ -0.19
SNX18Q96RF0 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC13.85□□□□□ -0.19
SNX18Q96RF0 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SNX18Q96RF0 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
SNX18Q96RF0 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC13.85□□□□□ -0.19
SNX18Q96RF0 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
SNX18Q96RF0 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SNX18Q96RF0 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
SNX18Q96RF0 RPL37AP1-201ENST00000412502 279 ntBASIC13.85□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms