Protein–RNA interactions for Protein: Q96QF0

RAB3IP, Rab-3A-interacting protein, humanhuman

Predicted RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IPQ96QF0 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC14.8□□□□□ -0.04
RAB3IPQ96QF0 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC14.8□□□□□ -0.04
RAB3IPQ96QF0 AC061975.2-201ENST00000581722 295 ntBASIC14.8□□□□□ -0.04
RAB3IPQ96QF0 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC14.8□□□□□ -0.04
RAB3IPQ96QF0 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC14.8□□□□□ -0.04
RAB3IPQ96QF0 ATG13-215ENST00000529655 2566 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
RAB3IPQ96QF0 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC14.8□□□□□ -0.04
RAB3IPQ96QF0 SGSM1-206ENST00000610372 5991 ntTSL 5 BASIC14.8□□□□□ -0.04
RAB3IPQ96QF0 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC14.8□□□□□ -0.04
RAB3IPQ96QF0 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
RAB3IPQ96QF0 ADCYAP1R1-201ENST00000304166 6487 ntAPPRIS P3 TSL 2 BASIC14.8□□□□□ -0.04
RAB3IPQ96QF0 PVR-205ENST00000425690 3325 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
RAB3IPQ96QF0 PPP2R5E-201ENST00000337537 6659 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
RAB3IPQ96QF0 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
RAB3IPQ96QF0 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
RAB3IPQ96QF0 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RAB3IPQ96QF0 IKZF1-204ENST00000349824 5757 ntTSL 5 BASIC14.8□□□□□ -0.04
RAB3IPQ96QF0 MKS1-201ENST00000313863 2091 ntTSL 5 BASIC14.8□□□□□ -0.04
RAB3IPQ96QF0 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC14.8□□□□□ -0.04
RAB3IPQ96QF0 MLX-202ENST00000346833 2334 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RAB3IPQ96QF0 INTS14-201ENST00000313182 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RAB3IPQ96QF0 MEGF11-201ENST00000288745 5707 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
RAB3IPQ96QF0 EGR2-201ENST00000242480 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RAB3IPQ96QF0 GAS6-AS1-201ENST00000458001 7169 ntTSL 5 BASIC14.79□□□□□ -0.04
RAB3IPQ96QF0 CELF1-214ENST00000531165 3650 ntTSL 2 BASIC14.79□□□□□ -0.04
RAB3IPQ96QF0 CEP126-201ENST00000263468 7039 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
RAB3IPQ96QF0 MCC-201ENST00000302475 8257 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
RAB3IPQ96QF0 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
RAB3IPQ96QF0 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RAB3IPQ96QF0 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
RAB3IPQ96QF0 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
RAB3IPQ96QF0 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
RAB3IPQ96QF0 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
RAB3IPQ96QF0 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
RAB3IPQ96QF0 ZFP64-203ENST00000361387 2545 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RAB3IPQ96QF0 HSPH1-202ENST00000380405 3480 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
RAB3IPQ96QF0 CRELD1-202ENST00000383811 2696 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RAB3IPQ96QF0 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
RAB3IPQ96QF0 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC14.79□□□□□ -0.04
RAB3IPQ96QF0 L3MBTL1-206ENST00000427442 3157 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
RAB3IPQ96QF0 MST1-202ENST00000449682 2621 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RAB3IPQ96QF0 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
RAB3IPQ96QF0 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC14.79□□□□□ -0.04
RAB3IPQ96QF0 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
RAB3IPQ96QF0 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC14.79□□□□□ -0.04
RAB3IPQ96QF0 AMT-221ENST00000538581 2038 ntTSL 2 BASIC14.79□□□□□ -0.04
RAB3IPQ96QF0 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
RAB3IPQ96QF0 ZNF843-202ENST00000564218 3816 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
RAB3IPQ96QF0 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC14.79□□□□□ -0.04
RAB3IPQ96QF0 MIR3652-201ENST00000579335 131 ntBASIC14.79□□□□□ -0.04
RAB3IPQ96QF0 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC14.79□□□□□ -0.04
RAB3IPQ96QF0 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
RAB3IPQ96QF0 AL607033.1-201ENST00000623900 1599 ntBASIC14.79□□□□□ -0.04
RAB3IPQ96QF0 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC14.79□□□□□ -0.04
RAB3IPQ96QF0 ADGRG6-204ENST00000367609 6887 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
RAB3IPQ96QF0 CES3-201ENST00000303334 3834 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
RAB3IPQ96QF0 CACNA1G-230ENST00000514717 6699 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
RAB3IPQ96QF0 COG6-202ENST00000416691 5257 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
RAB3IPQ96QF0 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC14.79□□□□□ -0.04
RAB3IPQ96QF0 RSBN1L-201ENST00000334955 6422 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
RAB3IPQ96QF0 UGP2-207ENST00000467648 2057 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
RAB3IPQ96QF0 LMBRD2-201ENST00000296603 8185 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RAB3IPQ96QF0 PTK7-203ENST00000345201 4071 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
RAB3IPQ96QF0 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
RAB3IPQ96QF0 AC025594.2-201ENST00000609480 3902 ntAPPRIS P1 TSL 3 BASIC14.78□□□□□ -0.04
RAB3IPQ96QF0 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
RAB3IPQ96QF0 GAP43-202ENST00000393780 1901 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
RAB3IPQ96QF0 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RAB3IPQ96QF0 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RAB3IPQ96QF0 JMJD6-208ENST00000617192 5517 ntTSL 5 BASIC14.78□□□□□ -0.04
RAB3IPQ96QF0 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RAB3IPQ96QF0 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
RAB3IPQ96QF0 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
RAB3IPQ96QF0 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
RAB3IPQ96QF0 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC14.78□□□□□ -0.04
RAB3IPQ96QF0 ZYG11A-201ENST00000371528 4469 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
RAB3IPQ96QF0 CCHCR1-203ENST00000396268 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
RAB3IPQ96QF0 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RAB3IPQ96QF0 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
RAB3IPQ96QF0 UBE3A-226ENST00000637886 8725 ntAPPRIS ALT1 TSL 5 BASIC14.78□□□□□ -0.04
RAB3IPQ96QF0 SPHK2-206ENST00000598088 2866 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
RAB3IPQ96QF0 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RAB3IPQ96QF0 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
RAB3IPQ96QF0 PARP1-203ENST00000366794 3958 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RAB3IPQ96QF0 MANBA-202ENST00000505239 2577 ntTSL 2 BASIC14.78□□□□□ -0.04
RAB3IPQ96QF0 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC14.78□□□□□ -0.04
RAB3IPQ96QF0 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
RAB3IPQ96QF0 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
RAB3IPQ96QF0 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RAB3IPQ96QF0 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
RAB3IPQ96QF0 MRPL20P1-201ENST00000400819 433 ntBASIC14.78□□□□□ -0.04
RAB3IPQ96QF0 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
RAB3IPQ96QF0 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
RAB3IPQ96QF0 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
RAB3IPQ96QF0 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC14.78□□□□□ -0.04
RAB3IPQ96QF0 EEF1DP4-201ENST00000446006 880 ntBASIC14.78□□□□□ -0.04
RAB3IPQ96QF0 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
RAB3IPQ96QF0 KRT16P4-201ENST00000453883 522 ntBASIC14.78□□□□□ -0.04
RAB3IPQ96QF0 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
RAB3IPQ96QF0 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC14.78□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 58.2 ms