Protein–RNA interactions for Protein: Q96PB1

CASD1, N-acetylneuraminate 9-O-acetyltransferase, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASD1Q96PB1 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
CASD1Q96PB1 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CASD1Q96PB1 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC15.9■□□□□ 0.14
CASD1Q96PB1 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
CASD1Q96PB1 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
CASD1Q96PB1 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CASD1Q96PB1 DKK4-201ENST00000220812 894 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CASD1Q96PB1 NUDT1-201ENST00000339737 698 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CASD1Q96PB1 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CASD1Q96PB1 BEX2-201ENST00000372674 668 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
CASD1Q96PB1 AC026316.1-201ENST00000398900 414 ntBASIC15.9■□□□□ 0.14
CASD1Q96PB1 AC131097.2-203ENST00000401641 507 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
CASD1Q96PB1 AC253536.4-201ENST00000440539 267 ntBASIC15.9■□□□□ 0.14
CASD1Q96PB1 TAPBP-241ENST00000489157 1299 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CASD1Q96PB1 AC084346.1-201ENST00000520962 528 ntTSL 4 BASIC15.9■□□□□ 0.14
CASD1Q96PB1 SAP25-201ENST00000538735 837 ntAPPRIS P2 TSL 3 BASIC15.9■□□□□ 0.14
CASD1Q96PB1 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC15.9■□□□□ 0.14
CASD1Q96PB1 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC15.9■□□□□ 0.14
CASD1Q96PB1 AC103691.2-201ENST00000618824 433 ntBASIC15.9■□□□□ 0.14
CASD1Q96PB1 AL031665.1-201ENST00000619766 572 ntTSL 4 BASIC15.9■□□□□ 0.14
CASD1Q96PB1 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CASD1Q96PB1 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CASD1Q96PB1 ZCCHC17-204ENST00000546109 1705 ntTSL 2 BASIC15.9■□□□□ 0.14
CASD1Q96PB1 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
CASD1Q96PB1 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CASD1Q96PB1 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CASD1Q96PB1 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
CASD1Q96PB1 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC15.89■□□□□ 0.13
CASD1Q96PB1 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CASD1Q96PB1 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC15.89■□□□□ 0.13
CASD1Q96PB1 AGER-201ENST00000375055 1369 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CASD1Q96PB1 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CASD1Q96PB1 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CASD1Q96PB1 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CASD1Q96PB1 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
CASD1Q96PB1 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CASD1Q96PB1 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CASD1Q96PB1 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC15.89■□□□□ 0.13
CASD1Q96PB1 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC15.89■□□□□ 0.13
CASD1Q96PB1 CRB3-201ENST00000308243 631 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
CASD1Q96PB1 CD1E-202ENST00000368155 696 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CASD1Q96PB1 CD1E-204ENST00000368157 399 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CASD1Q96PB1 TSPO2-201ENST00000373158 718 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CASD1Q96PB1 ARL16-201ENST00000397498 1227 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CASD1Q96PB1 LDHBP1-201ENST00000455730 1119 ntBASIC15.89■□□□□ 0.13
CASD1Q96PB1 PFN2-206ENST00000461930 606 ntTSL 4 BASIC15.89■□□□□ 0.13
CASD1Q96PB1 BHMT-206ENST00000524080 1207 ntTSL 2 BASIC15.89■□□□□ 0.13
CASD1Q96PB1 UBE3B-206ENST00000536398 1120 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CASD1Q96PB1 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
CASD1Q96PB1 AC008133.1-201ENST00000584688 557 ntTSL 4 BASIC15.89■□□□□ 0.13
CASD1Q96PB1 MEG3_2.1-201ENST00000611456 105 ntBASIC15.89■□□□□ 0.13
CASD1Q96PB1 ARL16-214ENST00000621051 1181 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CASD1Q96PB1 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
CASD1Q96PB1 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC15.89■□□□□ 0.13
CASD1Q96PB1 EPHX1-202ENST00000366837 1780 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CASD1Q96PB1 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CASD1Q96PB1 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CASD1Q96PB1 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CASD1Q96PB1 GPN3-201ENST00000228827 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CASD1Q96PB1 RAN-210ENST00000541630 1475 ntTSL 2 BASIC15.89■□□□□ 0.13
CASD1Q96PB1 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CASD1Q96PB1 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CASD1Q96PB1 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CASD1Q96PB1 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CASD1Q96PB1 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CASD1Q96PB1 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CASD1Q96PB1 METTL17-221ENST00000556670 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
CASD1Q96PB1 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CASD1Q96PB1 PPIL3-201ENST00000286175 1370 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CASD1Q96PB1 UBL7-201ENST00000361351 1360 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
CASD1Q96PB1 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CASD1Q96PB1 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CASD1Q96PB1 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CASD1Q96PB1 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CASD1Q96PB1 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CASD1Q96PB1 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CASD1Q96PB1 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
CASD1Q96PB1 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC15.88■□□□□ 0.13
CASD1Q96PB1 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
CASD1Q96PB1 OR9I1-201ENST00000302610 945 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
CASD1Q96PB1 IGF1-201ENST00000307046 1097 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CASD1Q96PB1 OR2K2-202ENST00000374428 1038 ntBASIC15.88■□□□□ 0.13
CASD1Q96PB1 FBXO44-203ENST00000376760 822 ntTSL 2 BASIC15.88■□□□□ 0.13
CASD1Q96PB1 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC15.88■□□□□ 0.13
CASD1Q96PB1 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
CASD1Q96PB1 IGF1-203ENST00000392904 761 ntTSL 5 BASIC15.88■□□□□ 0.13
CASD1Q96PB1 AL606491.1-201ENST00000412797 483 ntTSL 3 BASIC15.88■□□□□ 0.13
CASD1Q96PB1 LINC01006-202ENST00000418309 640 ntTSL 3 BASIC15.88■□□□□ 0.13
CASD1Q96PB1 HCFC1-AS1-201ENST00000438219 350 ntTSL 3 BASIC15.88■□□□□ 0.13
CASD1Q96PB1 FGFR3P1-201ENST00000449999 601 ntBASIC15.88■□□□□ 0.13
CASD1Q96PB1 ARMCX3-AS1-201ENST00000454228 490 ntTSL 3 BASIC15.88■□□□□ 0.13
CASD1Q96PB1 EFCAB10-201ENST00000460135 717 ntTSL 2 BASIC15.88■□□□□ 0.13
CASD1Q96PB1 AC008267.1-201ENST00000474858 1069 ntBASIC15.88■□□□□ 0.13
CASD1Q96PB1 RN7SL258P-201ENST00000478664 300 ntBASIC15.88■□□□□ 0.13
CASD1Q96PB1 AC091390.4-201ENST00000484974 491 ntTSL 3 BASIC15.88■□□□□ 0.13
CASD1Q96PB1 PRKRA-211ENST00000487082 1211 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CASD1Q96PB1 LINC01475-201ENST00000548010 766 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CASD1Q96PB1 AC026803.1-201ENST00000569130 274 ntBASIC15.88■□□□□ 0.13
CASD1Q96PB1 LGALS9C-215ENST00000584941 1104 ntTSL 5 BASIC15.88■□□□□ 0.13
CASD1Q96PB1 COX10-AS1-206ENST00000602743 576 ntTSL 5 BASIC15.88■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 58.8 ms