Protein–RNA interactions for Protein: Q96M43

NBPF4, Neuroblastoma breakpoint family member 4, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NBPF4Q96M43 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
NBPF4Q96M43 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC19.63■□□□□ 0.73
NBPF4Q96M43 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
NBPF4Q96M43 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
NBPF4Q96M43 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
NBPF4Q96M43 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
NBPF4Q96M43 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
NBPF4Q96M43 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
NBPF4Q96M43 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC19.62■□□□□ 0.73
NBPF4Q96M43 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
NBPF4Q96M43 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
NBPF4Q96M43 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
NBPF4Q96M43 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC19.62■□□□□ 0.73
NBPF4Q96M43 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
NBPF4Q96M43 HIGD1A-202ENST00000418900 1322 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
NBPF4Q96M43 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
NBPF4Q96M43 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC19.62■□□□□ 0.73
NBPF4Q96M43 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
NBPF4Q96M43 CD1E-202ENST00000368155 696 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
NBPF4Q96M43 CD1E-204ENST00000368157 399 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
NBPF4Q96M43 LBH-202ENST00000401506 485 ntTSL 3 BASIC19.62■□□□□ 0.73
NBPF4Q96M43 RPL3-202ENST00000401609 1289 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
NBPF4Q96M43 LINC01006-202ENST00000418309 640 ntTSL 3 BASIC19.62■□□□□ 0.73
NBPF4Q96M43 AC104784.1-201ENST00000473096 294 ntBASIC19.62■□□□□ 0.73
NBPF4Q96M43 POU5F1P2-201ENST00000521750 823 ntBASIC19.62■□□□□ 0.73
NBPF4Q96M43 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC19.62■□□□□ 0.73
NBPF4Q96M43 REC114-202ENST00000560581 833 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
NBPF4Q96M43 AC133919.1-201ENST00000562203 416 ntTSL 3 BASIC19.62■□□□□ 0.73
NBPF4Q96M43 AC008736.2-201ENST00000587554 516 ntTSL 2 BASIC19.62■□□□□ 0.73
NBPF4Q96M43 AP005264.3-201ENST00000592370 485 ntTSL 5 BASIC19.62■□□□□ 0.73
NBPF4Q96M43 AL109837.1-201ENST00000603272 613 ntBASIC19.62■□□□□ 0.73
NBPF4Q96M43 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC19.62■□□□□ 0.73
NBPF4Q96M43 Metazoa_SRP.65-201ENST00000615602 264 ntBASIC19.62■□□□□ 0.73
NBPF4Q96M43 MBD3L2B-201ENST00000636986 860 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
NBPF4Q96M43 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
NBPF4Q96M43 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
NBPF4Q96M43 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
NBPF4Q96M43 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC19.62■□□□□ 0.73
NBPF4Q96M43 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
NBPF4Q96M43 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
NBPF4Q96M43 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
NBPF4Q96M43 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
NBPF4Q96M43 SMTNL1-202ENST00000527972 1649 ntAPPRIS P2 TSL 5 BASIC19.62■□□□□ 0.73
NBPF4Q96M43 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
NBPF4Q96M43 METTL17-221ENST00000556670 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
NBPF4Q96M43 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC19.61■□□□□ 0.73
NBPF4Q96M43 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
NBPF4Q96M43 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
NBPF4Q96M43 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
NBPF4Q96M43 CFAP36-201ENST00000339012 1373 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
NBPF4Q96M43 ERGIC3-203ENST00000357394 1357 ntAPPRIS P4 TSL 2 BASIC19.61■□□□□ 0.73
NBPF4Q96M43 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC19.61■□□□□ 0.73
NBPF4Q96M43 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC19.61■□□□□ 0.73
NBPF4Q96M43 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
NBPF4Q96M43 ARMC12-203ENST00000373869 1111 ntTSL 2 BASIC19.61■□□□□ 0.73
NBPF4Q96M43 ESD-202ENST00000378720 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
NBPF4Q96M43 PFN2-206ENST00000461930 606 ntTSL 4 BASIC19.61■□□□□ 0.73
NBPF4Q96M43 TMEM218-205ENST00000527271 706 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
NBPF4Q96M43 STUB1-204ENST00000564370 875 ntTSL 2 BASIC19.61■□□□□ 0.73
NBPF4Q96M43 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC19.61■□□□□ 0.73
NBPF4Q96M43 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
NBPF4Q96M43 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC19.61■□□□□ 0.73
NBPF4Q96M43 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
NBPF4Q96M43 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
NBPF4Q96M43 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
NBPF4Q96M43 TMBIM7P-202ENST00000641474 1516 ntBASIC19.61■□□□□ 0.73
NBPF4Q96M43 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
NBPF4Q96M43 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
NBPF4Q96M43 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC19.6■□□□□ 0.73
NBPF4Q96M43 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
NBPF4Q96M43 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
NBPF4Q96M43 BNIP1-201ENST00000231668 1339 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
NBPF4Q96M43 DNASE1L2-204ENST00000567494 1301 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
NBPF4Q96M43 CELP-203ENST00000624767 2414 ntTSL 5 BASIC19.6■□□□□ 0.73
NBPF4Q96M43 CRB3-201ENST00000308243 631 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
NBPF4Q96M43 AL627231.1-201ENST00000394467 1125 ntBASIC19.6■□□□□ 0.73
NBPF4Q96M43 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
NBPF4Q96M43 AL139339.1-201ENST00000411906 657 ntTSL 2 BASIC19.6■□□□□ 0.73
NBPF4Q96M43 LINC00322-201ENST00000450205 699 ntTSL 3 BASIC19.6■□□□□ 0.73
NBPF4Q96M43 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
NBPF4Q96M43 RN7SL258P-201ENST00000478664 300 ntBASIC19.6■□□□□ 0.73
NBPF4Q96M43 SIRT3-210ENST00000529382 1225 ntTSL 2 BASIC19.6■□□□□ 0.73
NBPF4Q96M43 ANP32A-210ENST00000560303 724 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
NBPF4Q96M43 AC135983.1-201ENST00000562108 1097 ntTSL 2 BASIC19.6■□□□□ 0.73
NBPF4Q96M43 HS3ST3A1-202ENST00000578576 750 ntTSL 3 BASIC19.6■□□□□ 0.73
NBPF4Q96M43 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC19.6■□□□□ 0.73
NBPF4Q96M43 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
NBPF4Q96M43 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
NBPF4Q96M43 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC19.6■□□□□ 0.73
NBPF4Q96M43 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
NBPF4Q96M43 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
NBPF4Q96M43 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC19.6■□□□□ 0.73
NBPF4Q96M43 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
NBPF4Q96M43 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
NBPF4Q96M43 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
NBPF4Q96M43 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
NBPF4Q96M43 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
NBPF4Q96M43 TMBIM7P-203ENST00000641617 1718 ntBASIC19.59■□□□□ 0.73
NBPF4Q96M43 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
NBPF4Q96M43 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 51.6 ms