Protein–RNA interactions for Protein: Q92738

USP6NL, USP6 N-terminal-like protein, humanhuman

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NLQ92738 AC079336.4-201ENST00000584219 408 ntTSL 2 BASIC16.98■□□□□ 0.31
USP6NLQ92738 RPS15-202ENST00000585665 467 ntTSL 3 BASIC16.98■□□□□ 0.31
USP6NLQ92738 FAM236A-201ENST00000593662 453 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
USP6NLQ92738 FAM236B-201ENST00000596535 465 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
USP6NLQ92738 AC136475.1-202ENST00000602429 1151 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
USP6NLQ92738 ROPN1-211ENST00000620893 1006 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
USP6NLQ92738 RPL35-206ENST00000629845 340 ntTSL 5 BASIC16.98■□□□□ 0.31
USP6NLQ92738 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC16.98■□□□□ 0.31
USP6NLQ92738 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
USP6NLQ92738 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
USP6NLQ92738 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
USP6NLQ92738 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
USP6NLQ92738 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
USP6NLQ92738 OXNAD1-202ENST00000435829 1643 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
USP6NLQ92738 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC16.98■□□□□ 0.31
USP6NLQ92738 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC16.98■□□□□ 0.31
USP6NLQ92738 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
USP6NLQ92738 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
USP6NLQ92738 ERGIC3-203ENST00000357394 1357 ntAPPRIS P4 TSL 2 BASIC16.98■□□□□ 0.31
USP6NLQ92738 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
USP6NLQ92738 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC16.98■□□□□ 0.31
USP6NLQ92738 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
USP6NLQ92738 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
USP6NLQ92738 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
USP6NLQ92738 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
USP6NLQ92738 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
USP6NLQ92738 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
USP6NLQ92738 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
USP6NLQ92738 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
USP6NLQ92738 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC16.97■□□□□ 0.31
USP6NLQ92738 DIABLO-201ENST00000267169 1316 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
USP6NLQ92738 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
USP6NLQ92738 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
USP6NLQ92738 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
USP6NLQ92738 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC16.97■□□□□ 0.31
USP6NLQ92738 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
USP6NLQ92738 SCGN-203ENST00000612225 1402 ntTSL 5 BASIC16.97■□□□□ 0.31
USP6NLQ92738 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
USP6NLQ92738 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
USP6NLQ92738 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
USP6NLQ92738 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
USP6NLQ92738 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
USP6NLQ92738 ANK1-203ENST00000314214 1185 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
USP6NLQ92738 UQCRQ-203ENST00000378670 839 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
USP6NLQ92738 AL606491.1-201ENST00000412797 483 ntTSL 3 BASIC16.97■□□□□ 0.31
USP6NLQ92738 AC069277.1-202ENST00000414438 761 ntTSL 3 BASIC16.97■□□□□ 0.31
USP6NLQ92738 AC078875.1-201ENST00000431907 724 ntBASIC16.97■□□□□ 0.31
USP6NLQ92738 AC078991.1-201ENST00000437297 610 ntBASIC16.97■□□□□ 0.31
USP6NLQ92738 HCFC1-AS1-201ENST00000438219 350 ntTSL 3 BASIC16.97■□□□□ 0.31
USP6NLQ92738 AC114501.1-201ENST00000445949 172 ntBASIC16.97■□□□□ 0.31
USP6NLQ92738 RN7SL258P-201ENST00000478664 300 ntBASIC16.97■□□□□ 0.31
USP6NLQ92738 POU5F1P2-201ENST00000521750 823 ntBASIC16.97■□□□□ 0.31
USP6NLQ92738 NDUFC2-KCTD14-202ENST00000530054 656 ntAPPRIS P3 TSL 2 BASIC16.97■□□□□ 0.31
USP6NLQ92738 PGAM1P5-201ENST00000548011 764 ntBASIC16.97■□□□□ 0.31
USP6NLQ92738 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC16.97■□□□□ 0.31
USP6NLQ92738 AC133919.1-201ENST00000562203 416 ntTSL 3 BASIC16.97■□□□□ 0.31
USP6NLQ92738 AC135983.4-201ENST00000564116 1262 ntBASIC16.97■□□□□ 0.31
USP6NLQ92738 STUB1-204ENST00000564370 875 ntTSL 2 BASIC16.97■□□□□ 0.31
USP6NLQ92738 AC026803.1-201ENST00000569130 274 ntBASIC16.97■□□□□ 0.31
USP6NLQ92738 AC138894.2-201ENST00000602838 371 ntBASIC16.97■□□□□ 0.31
USP6NLQ92738 MIR6842-201ENST00000612539 65 ntBASIC16.97■□□□□ 0.31
USP6NLQ92738 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
USP6NLQ92738 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
USP6NLQ92738 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
USP6NLQ92738 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
USP6NLQ92738 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
USP6NLQ92738 TOB1-AS1-201ENST00000416263 1351 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
USP6NLQ92738 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC16.97■□□□□ 0.31
USP6NLQ92738 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC16.97■□□□□ 0.31
USP6NLQ92738 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC16.97■□□□□ 0.31
USP6NLQ92738 GPN3-201ENST00000228827 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
USP6NLQ92738 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
USP6NLQ92738 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC16.97■□□□□ 0.31
USP6NLQ92738 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC16.97■□□□□ 0.31
USP6NLQ92738 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
USP6NLQ92738 CKMT1B-201ENST00000300283 1779 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
USP6NLQ92738 CKMT1A-204ENST00000434505 1779 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
USP6NLQ92738 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC16.97■□□□□ 0.31
USP6NLQ92738 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
USP6NLQ92738 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
USP6NLQ92738 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
USP6NLQ92738 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
USP6NLQ92738 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
USP6NLQ92738 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
USP6NLQ92738 AC068418.2-201ENST00000577309 3703 ntBASIC16.96■□□□□ 0.31
USP6NLQ92738 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
USP6NLQ92738 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
USP6NLQ92738 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC16.96■□□□□ 0.31
USP6NLQ92738 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
USP6NLQ92738 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
USP6NLQ92738 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
USP6NLQ92738 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC16.96■□□□□ 0.31
USP6NLQ92738 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
USP6NLQ92738 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
USP6NLQ92738 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
USP6NLQ92738 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
USP6NLQ92738 IL9-201ENST00000274520 591 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
USP6NLQ92738 CITED1-202ENST00000373619 886 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
USP6NLQ92738 OR2K2-202ENST00000374428 1038 ntBASIC16.96■□□□□ 0.31
USP6NLQ92738 ESD-202ENST00000378720 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 65.6 ms