Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC17.99■□□□□ 0.47
SNED1Q8TER0 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
SNED1Q8TER0 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SNED1Q8TER0 MOGAT2-201ENST00000198801 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SNED1Q8TER0 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC17.99■□□□□ 0.47
SNED1Q8TER0 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC17.99■□□□□ 0.47
SNED1Q8TER0 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
SNED1Q8TER0 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SNED1Q8TER0 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC17.99■□□□□ 0.47
SNED1Q8TER0 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
SNED1Q8TER0 FHL2-206ENST00000408995 1367 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
SNED1Q8TER0 KRT8P28-201ENST00000433288 1390 ntBASIC17.99■□□□□ 0.47
SNED1Q8TER0 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
SNED1Q8TER0 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
SNED1Q8TER0 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SNED1Q8TER0 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SNED1Q8TER0 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
SNED1Q8TER0 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
SNED1Q8TER0 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC17.98■□□□□ 0.47
SNED1Q8TER0 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
SNED1Q8TER0 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
SNED1Q8TER0 FERD3L-201ENST00000275461 640 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
SNED1Q8TER0 PPA2-204ENST00000354147 667 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
SNED1Q8TER0 OGFR-AS1-201ENST00000431361 668 ntTSL 2 BASIC17.98■□□□□ 0.47
SNED1Q8TER0 PPA2-205ENST00000432483 859 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
SNED1Q8TER0 AL139241.1-201ENST00000433374 1168 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
SNED1Q8TER0 BX276092.5-201ENST00000439926 886 ntTSL 5 BASIC17.98■□□□□ 0.47
SNED1Q8TER0 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
SNED1Q8TER0 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC17.98■□□□□ 0.47
SNED1Q8TER0 ZNF124-206ENST00000543802 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
SNED1Q8TER0 AL022344.2-201ENST00000568976 968 ntBASIC17.98■□□□□ 0.47
SNED1Q8TER0 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SNED1Q8TER0 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
SNED1Q8TER0 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SNED1Q8TER0 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SNED1Q8TER0 AC136621.1-201ENST00000624017 2304 ntBASIC17.98■□□□□ 0.47
SNED1Q8TER0 SALL4P5-201ENST00000419001 1760 ntBASIC17.98■□□□□ 0.47
SNED1Q8TER0 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC17.98■□□□□ 0.47
SNED1Q8TER0 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
SNED1Q8TER0 C18orf15-201ENST00000623680 2534 ntBASIC17.98■□□□□ 0.47
SNED1Q8TER0 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
SNED1Q8TER0 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC17.98■□□□□ 0.47
SNED1Q8TER0 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
SNED1Q8TER0 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
SNED1Q8TER0 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SNED1Q8TER0 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
SNED1Q8TER0 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SNED1Q8TER0 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SNED1Q8TER0 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SNED1Q8TER0 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
SNED1Q8TER0 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SNED1Q8TER0 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SNED1Q8TER0 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC17.98■□□□□ 0.47
SNED1Q8TER0 BGLAP-201ENST00000368272 732 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SNED1Q8TER0 AL592076.1-201ENST00000424448 303 ntBASIC17.98■□□□□ 0.47
SNED1Q8TER0 AL139008.1-201ENST00000437894 228 ntBASIC17.98■□□□□ 0.47
SNED1Q8TER0 AL138731.1-201ENST00000452624 739 ntTSL 3 BASIC17.98■□□□□ 0.47
SNED1Q8TER0 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC17.98■□□□□ 0.47
SNED1Q8TER0 TCL1A-205ENST00000555202 717 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SNED1Q8TER0 AC012645.2-201ENST00000566190 553 ntTSL 4 BASIC17.98■□□□□ 0.47
SNED1Q8TER0 MIR5196-201ENST00000578146 115 ntBASIC17.98■□□□□ 0.47
SNED1Q8TER0 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC17.97■□□□□ 0.47
SNED1Q8TER0 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
SNED1Q8TER0 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC17.97■□□□□ 0.47
SNED1Q8TER0 BTBD8-201ENST00000342818 1412 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SNED1Q8TER0 CCDC169-SOHLH2-201ENST00000511166 2051 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
SNED1Q8TER0 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC17.97■□□□□ 0.47
SNED1Q8TER0 TMEM144-209ENST00000509278 1633 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
SNED1Q8TER0 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
SNED1Q8TER0 PCNA-202ENST00000379160 1359 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
SNED1Q8TER0 FAM168A-204ENST00000450446 1364 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
SNED1Q8TER0 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
SNED1Q8TER0 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC17.97■□□□□ 0.47
SNED1Q8TER0 RASGEF1B-202ENST00000335927 1756 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
SNED1Q8TER0 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
SNED1Q8TER0 PCBP1-AS1-214ENST00000419542 1309 ntTSL 5 BASIC17.97■□□□□ 0.47
SNED1Q8TER0 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
SNED1Q8TER0 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
SNED1Q8TER0 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC17.97■□□□□ 0.47
SNED1Q8TER0 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC17.97■□□□□ 0.47
SNED1Q8TER0 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SNED1Q8TER0 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
SNED1Q8TER0 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC17.97■□□□□ 0.47
SNED1Q8TER0 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
SNED1Q8TER0 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SNED1Q8TER0 HFE-203ENST00000336625 804 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
SNED1Q8TER0 CCDC167-201ENST00000373408 619 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SNED1Q8TER0 MAD2L2-206ENST00000376672 1002 ntTSL 3 BASIC17.97■□□□□ 0.47
SNED1Q8TER0 NDUFS7-203ENST00000414651 841 ntTSL 5 BASIC17.97■□□□□ 0.47
SNED1Q8TER0 PPOX-204ENST00000462866 473 ntTSL 5 BASIC17.97■□□□□ 0.47
SNED1Q8TER0 AL157792.1-201ENST00000488281 530 ntBASIC17.97■□□□□ 0.47
SNED1Q8TER0 AC107463.1-201ENST00000508605 667 ntTSL 3 BASIC17.97■□□□□ 0.47
SNED1Q8TER0 ALG1L6P-201ENST00000515248 758 ntBASIC17.97■□□□□ 0.47
SNED1Q8TER0 ORAOV1-209ENST00000538554 1000 ntTSL 2 BASIC17.97■□□□□ 0.47
SNED1Q8TER0 LINC02417-201ENST00000542449 515 ntTSL 2 BASIC17.97■□□□□ 0.47
SNED1Q8TER0 AC025154.2-202ENST00000552379 592 ntTSL 3 BASIC17.97■□□□□ 0.47
SNED1Q8TER0 AC011500.3-201ENST00000594676 647 ntTSL 4 BASIC17.97■□□□□ 0.47
SNED1Q8TER0 AC007326.1-201ENST00000604539 458 ntBASIC17.97■□□□□ 0.47
SNED1Q8TER0 ASNSD1-206ENST00000607062 968 ntTSL 5 BASIC17.97■□□□□ 0.47
SNED1Q8TER0 AC009145.4-201ENST00000625119 1294 ntBASIC17.97■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms