Protein–RNA interactions for Protein: Q8NFU1

BEST2, Bestrophin-2, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST2Q8NFU1 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC16.21■□□□□ 0.19
BEST2Q8NFU1 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
BEST2Q8NFU1 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
BEST2Q8NFU1 AC091951.1-201ENST00000512854 2465 ntBASIC16.21■□□□□ 0.18
BEST2Q8NFU1 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
BEST2Q8NFU1 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
BEST2Q8NFU1 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC16.2■□□□□ 0.18
BEST2Q8NFU1 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
BEST2Q8NFU1 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
BEST2Q8NFU1 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
BEST2Q8NFU1 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
BEST2Q8NFU1 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC16.2■□□□□ 0.18
BEST2Q8NFU1 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC16.2■□□□□ 0.18
BEST2Q8NFU1 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC16.2■□□□□ 0.18
BEST2Q8NFU1 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
BEST2Q8NFU1 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
BEST2Q8NFU1 SLC9A7P1-201ENST00000554295 3311 ntBASIC16.2■□□□□ 0.18
BEST2Q8NFU1 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
BEST2Q8NFU1 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
BEST2Q8NFU1 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
BEST2Q8NFU1 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
BEST2Q8NFU1 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC16.2■□□□□ 0.18
BEST2Q8NFU1 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
BEST2Q8NFU1 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
BEST2Q8NFU1 BRWD1P1-201ENST00000401091 371 ntBASIC16.2■□□□□ 0.18
BEST2Q8NFU1 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
BEST2Q8NFU1 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
BEST2Q8NFU1 RPL13AP20-201ENST00000459725 609 ntBASIC16.2■□□□□ 0.18
BEST2Q8NFU1 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC16.2■□□□□ 0.18
BEST2Q8NFU1 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
BEST2Q8NFU1 AP003171.2-201ENST00000528208 925 ntBASIC16.2■□□□□ 0.18
BEST2Q8NFU1 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
BEST2Q8NFU1 PPY2P-201ENST00000582808 702 ntBASIC16.2■□□□□ 0.18
BEST2Q8NFU1 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
BEST2Q8NFU1 AC073413.1-201ENST00000603927 732 ntBASIC16.2■□□□□ 0.18
BEST2Q8NFU1 ZACNP1-201ENST00000612259 710 ntBASIC16.2■□□□□ 0.18
BEST2Q8NFU1 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC16.2■□□□□ 0.18
BEST2Q8NFU1 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
BEST2Q8NFU1 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
BEST2Q8NFU1 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC16.2■□□□□ 0.18
BEST2Q8NFU1 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC16.2■□□□□ 0.18
BEST2Q8NFU1 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
BEST2Q8NFU1 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
BEST2Q8NFU1 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
BEST2Q8NFU1 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC16.2■□□□□ 0.18
BEST2Q8NFU1 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
BEST2Q8NFU1 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
BEST2Q8NFU1 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
BEST2Q8NFU1 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
BEST2Q8NFU1 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
BEST2Q8NFU1 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
BEST2Q8NFU1 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
BEST2Q8NFU1 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC16.19■□□□□ 0.18
BEST2Q8NFU1 AC023090.2-201ENST00000625182 2110 ntBASIC16.19■□□□□ 0.18
BEST2Q8NFU1 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC16.19■□□□□ 0.18
BEST2Q8NFU1 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
BEST2Q8NFU1 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
BEST2Q8NFU1 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
BEST2Q8NFU1 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
BEST2Q8NFU1 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC16.19■□□□□ 0.18
BEST2Q8NFU1 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
BEST2Q8NFU1 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC16.19■□□□□ 0.18
BEST2Q8NFU1 ACE3P-201ENST00000423435 1973 ntBASIC16.19■□□□□ 0.18
BEST2Q8NFU1 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
BEST2Q8NFU1 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
BEST2Q8NFU1 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
BEST2Q8NFU1 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
BEST2Q8NFU1 SERF2-209ENST00000409646 559 ntTSL 4 BASIC16.19■□□□□ 0.18
BEST2Q8NFU1 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC16.19■□□□□ 0.18
BEST2Q8NFU1 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC16.19■□□□□ 0.18
BEST2Q8NFU1 Z93015.1-201ENST00000451718 390 ntBASIC16.19■□□□□ 0.18
BEST2Q8NFU1 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
BEST2Q8NFU1 AC108725.1-201ENST00000495472 409 ntBASIC16.19■□□□□ 0.18
BEST2Q8NFU1 RIT1-205ENST00000539040 919 ntTSL 2 BASIC16.19■□□□□ 0.18
BEST2Q8NFU1 USB1-203ENST00000539737 1212 ntTSL 2 BASIC16.19■□□□□ 0.18
BEST2Q8NFU1 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC16.19■□□□□ 0.18
BEST2Q8NFU1 EEF1DP1-201ENST00000585891 896 ntBASIC16.19■□□□□ 0.18
BEST2Q8NFU1 AC138696.2-201ENST00000607376 223 ntBASIC16.19■□□□□ 0.18
BEST2Q8NFU1 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC16.19■□□□□ 0.18
BEST2Q8NFU1 ANKRD26P3-201ENST00000454044 2748 ntBASIC16.19■□□□□ 0.18
BEST2Q8NFU1 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC16.19■□□□□ 0.18
BEST2Q8NFU1 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
BEST2Q8NFU1 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC16.19■□□□□ 0.18
BEST2Q8NFU1 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
BEST2Q8NFU1 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
BEST2Q8NFU1 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
BEST2Q8NFU1 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
BEST2Q8NFU1 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC16.19■□□□□ 0.18
BEST2Q8NFU1 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
BEST2Q8NFU1 AC126755.1-201ENST00000525846 6405 ntBASIC16.19■□□□□ 0.18
BEST2Q8NFU1 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
BEST2Q8NFU1 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
BEST2Q8NFU1 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
BEST2Q8NFU1 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
BEST2Q8NFU1 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
BEST2Q8NFU1 AP000593.2-201ENST00000542775 1433 ntBASIC16.19■□□□□ 0.18
BEST2Q8NFU1 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
BEST2Q8NFU1 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC16.18■□□□□ 0.18
BEST2Q8NFU1 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
BEST2Q8NFU1 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 50.6 ms