Protein–RNA interactions for Protein: Q8N1B4

VPS52, Vacuolar protein sorting-associated protein 52 homolog, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52Q8N1B4 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC16.44■□□□□ 0.22
VPS52Q8N1B4 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
VPS52Q8N1B4 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC16.44■□□□□ 0.22
VPS52Q8N1B4 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC16.44■□□□□ 0.22
VPS52Q8N1B4 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC16.44■□□□□ 0.22
VPS52Q8N1B4 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
VPS52Q8N1B4 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
VPS52Q8N1B4 MCHR2-202ENST00000369212 1311 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
VPS52Q8N1B4 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC16.43■□□□□ 0.22
VPS52Q8N1B4 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
VPS52Q8N1B4 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
VPS52Q8N1B4 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC16.43■□□□□ 0.22
VPS52Q8N1B4 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
VPS52Q8N1B4 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
VPS52Q8N1B4 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
VPS52Q8N1B4 TNRC18P2-201ENST00000417666 2714 ntBASIC16.43■□□□□ 0.22
VPS52Q8N1B4 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
VPS52Q8N1B4 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC16.43■□□□□ 0.22
VPS52Q8N1B4 CICP13-201ENST00000422015 2789 ntBASIC16.43■□□□□ 0.22
VPS52Q8N1B4 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC16.43■□□□□ 0.22
VPS52Q8N1B4 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
VPS52Q8N1B4 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC16.43■□□□□ 0.22
VPS52Q8N1B4 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC16.43■□□□□ 0.22
VPS52Q8N1B4 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
VPS52Q8N1B4 CATSPERZ-201ENST00000328404 743 ntAPPRIS P5 TSL 1 (best) BASIC16.43■□□□□ 0.22
VPS52Q8N1B4 TPM3P8-201ENST00000330554 643 ntBASIC16.43■□□□□ 0.22
VPS52Q8N1B4 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC16.43■□□□□ 0.22
VPS52Q8N1B4 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
VPS52Q8N1B4 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
VPS52Q8N1B4 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC16.43■□□□□ 0.22
VPS52Q8N1B4 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
VPS52Q8N1B4 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC16.43■□□□□ 0.22
VPS52Q8N1B4 NUS1P3-201ENST00000423502 862 ntBASIC16.43■□□□□ 0.22
VPS52Q8N1B4 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC16.43■□□□□ 0.22
VPS52Q8N1B4 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC16.43■□□□□ 0.22
VPS52Q8N1B4 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
VPS52Q8N1B4 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC16.43■□□□□ 0.22
VPS52Q8N1B4 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC16.43■□□□□ 0.22
VPS52Q8N1B4 ARTN-209ENST00000479128 471 ntTSL 3 BASIC16.43■□□□□ 0.22
VPS52Q8N1B4 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC16.43■□□□□ 0.22
VPS52Q8N1B4 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC16.43■□□□□ 0.22
VPS52Q8N1B4 AC104982.3-201ENST00000581995 514 ntBASIC16.43■□□□□ 0.22
VPS52Q8N1B4 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC16.43■□□□□ 0.22
VPS52Q8N1B4 EEF1DP1-201ENST00000585891 896 ntBASIC16.43■□□□□ 0.22
VPS52Q8N1B4 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
VPS52Q8N1B4 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
VPS52Q8N1B4 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC16.43■□□□□ 0.22
VPS52Q8N1B4 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC16.43■□□□□ 0.22
VPS52Q8N1B4 MYO15B-237ENST00000642007 4893 ntBASIC16.43■□□□□ 0.22
VPS52Q8N1B4 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
VPS52Q8N1B4 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
VPS52Q8N1B4 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC16.43■□□□□ 0.22
VPS52Q8N1B4 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC16.43■□□□□ 0.22
VPS52Q8N1B4 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC16.43■□□□□ 0.22
VPS52Q8N1B4 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
VPS52Q8N1B4 AL354989.2-201ENST00000435838 1540 ntBASIC16.43■□□□□ 0.22
VPS52Q8N1B4 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
VPS52Q8N1B4 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
VPS52Q8N1B4 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
VPS52Q8N1B4 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
VPS52Q8N1B4 AC148477.4-201ENST00000613430 1793 ntBASIC16.43■□□□□ 0.22
VPS52Q8N1B4 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC16.43■□□□□ 0.22
VPS52Q8N1B4 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
VPS52Q8N1B4 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
VPS52Q8N1B4 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC16.43■□□□□ 0.22
VPS52Q8N1B4 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
VPS52Q8N1B4 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
VPS52Q8N1B4 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
VPS52Q8N1B4 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
VPS52Q8N1B4 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
VPS52Q8N1B4 GRN-222ENST00000639447 1314 ntTSL 2 BASIC16.43■□□□□ 0.22
VPS52Q8N1B4 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
VPS52Q8N1B4 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
VPS52Q8N1B4 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
VPS52Q8N1B4 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
VPS52Q8N1B4 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
VPS52Q8N1B4 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
VPS52Q8N1B4 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC16.42■□□□□ 0.22
VPS52Q8N1B4 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC16.42■□□□□ 0.22
VPS52Q8N1B4 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC16.42■□□□□ 0.22
VPS52Q8N1B4 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
VPS52Q8N1B4 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
VPS52Q8N1B4 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
VPS52Q8N1B4 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
VPS52Q8N1B4 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
VPS52Q8N1B4 AC015818.8-201ENST00000587907 1519 ntBASIC16.42■□□□□ 0.22
VPS52Q8N1B4 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
VPS52Q8N1B4 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC16.42■□□□□ 0.22
VPS52Q8N1B4 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
VPS52Q8N1B4 CALR4P-201ENST00000431943 946 ntBASIC16.42■□□□□ 0.22
VPS52Q8N1B4 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC16.42■□□□□ 0.22
VPS52Q8N1B4 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC16.42■□□□□ 0.22
VPS52Q8N1B4 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC16.42■□□□□ 0.22
VPS52Q8N1B4 RPSAP36-202ENST00000494591 1261 ntBASIC16.42■□□□□ 0.22
VPS52Q8N1B4 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
VPS52Q8N1B4 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC16.42■□□□□ 0.22
VPS52Q8N1B4 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC16.42■□□□□ 0.22
VPS52Q8N1B4 RN7SL48P-201ENST00000579283 293 ntBASIC16.42■□□□□ 0.22
VPS52Q8N1B4 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC16.42■□□□□ 0.22
VPS52Q8N1B4 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 63.4 ms