Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
LRRC28Q86X40 CCDC74BP1-201ENST00000508880 1123 ntBASIC13.53□□□□□ -0.24
LRRC28Q86X40 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC13.53□□□□□ -0.24
LRRC28Q86X40 AL079307.3-201ENST00000556114 283 ntBASIC13.53□□□□□ -0.24
LRRC28Q86X40 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
LRRC28Q86X40 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC13.53□□□□□ -0.24
LRRC28Q86X40 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC13.53□□□□□ -0.24
LRRC28Q86X40 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC13.53□□□□□ -0.24
LRRC28Q86X40 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC13.53□□□□□ -0.24
LRRC28Q86X40 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
LRRC28Q86X40 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
LRRC28Q86X40 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
LRRC28Q86X40 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC13.53□□□□□ -0.24
LRRC28Q86X40 MST1P2-201ENST00000457982 2291 ntBASIC13.53□□□□□ -0.24
LRRC28Q86X40 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
LRRC28Q86X40 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
LRRC28Q86X40 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
LRRC28Q86X40 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
LRRC28Q86X40 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
LRRC28Q86X40 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
LRRC28Q86X40 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC13.53□□□□□ -0.24
LRRC28Q86X40 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
LRRC28Q86X40 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.24
LRRC28Q86X40 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC13.52□□□□□ -0.24
LRRC28Q86X40 ADAMTS7P1-201ENST00000613213 4793 ntBASIC13.52□□□□□ -0.24
LRRC28Q86X40 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC13.52□□□□□ -0.24
LRRC28Q86X40 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
LRRC28Q86X40 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
LRRC28Q86X40 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
LRRC28Q86X40 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
LRRC28Q86X40 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
LRRC28Q86X40 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
LRRC28Q86X40 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
LRRC28Q86X40 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
LRRC28Q86X40 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
LRRC28Q86X40 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
LRRC28Q86X40 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
LRRC28Q86X40 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
LRRC28Q86X40 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC13.52□□□□□ -0.25
LRRC28Q86X40 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC13.52□□□□□ -0.25
LRRC28Q86X40 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
LRRC28Q86X40 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
LRRC28Q86X40 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC13.52□□□□□ -0.25
LRRC28Q86X40 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC13.52□□□□□ -0.25
LRRC28Q86X40 MPI-209ENST00000564003 1195 ntTSL 2 BASIC13.52□□□□□ -0.25
LRRC28Q86X40 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC13.52□□□□□ -0.25
LRRC28Q86X40 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
LRRC28Q86X40 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC13.52□□□□□ -0.25
LRRC28Q86X40 PRR29-209ENST00000582540 967 ntTSL 2 BASIC13.52□□□□□ -0.25
LRRC28Q86X40 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC13.52□□□□□ -0.25
LRRC28Q86X40 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
LRRC28Q86X40 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
LRRC28Q86X40 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC13.52□□□□□ -0.25
LRRC28Q86X40 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC13.52□□□□□ -0.25
LRRC28Q86X40 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC13.52□□□□□ -0.25
LRRC28Q86X40 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
LRRC28Q86X40 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
LRRC28Q86X40 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
LRRC28Q86X40 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
LRRC28Q86X40 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC13.52□□□□□ -0.25
LRRC28Q86X40 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
LRRC28Q86X40 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
LRRC28Q86X40 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC13.52□□□□□ -0.25
LRRC28Q86X40 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
LRRC28Q86X40 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
LRRC28Q86X40 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
LRRC28Q86X40 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
LRRC28Q86X40 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
LRRC28Q86X40 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC13.51□□□□□ -0.25
LRRC28Q86X40 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
LRRC28Q86X40 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC13.51□□□□□ -0.25
LRRC28Q86X40 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
LRRC28Q86X40 TCAF1P1-201ENST00000414990 2232 ntBASIC13.51□□□□□ -0.25
LRRC28Q86X40 C22orf34-204ENST00000414287 2197 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
LRRC28Q86X40 FES-203ENST00000394302 2133 ntTSL 5 BASIC13.51□□□□□ -0.25
LRRC28Q86X40 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
LRRC28Q86X40 PPP5D1-201ENST00000414155 1882 ntAPPRIS P5 TSL 2 BASIC13.51□□□□□ -0.25
LRRC28Q86X40 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC13.51□□□□□ -0.25
LRRC28Q86X40 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC13.51□□□□□ -0.25
LRRC28Q86X40 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
LRRC28Q86X40 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
LRRC28Q86X40 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
LRRC28Q86X40 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
LRRC28Q86X40 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC13.51□□□□□ -0.25
LRRC28Q86X40 AC087499.5-201ENST00000452760 1342 ntBASIC13.51□□□□□ -0.25
LRRC28Q86X40 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
LRRC28Q86X40 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC13.51□□□□□ -0.25
LRRC28Q86X40 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
LRRC28Q86X40 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
LRRC28Q86X40 SPDYE17-201ENST00000412399 783 ntBASIC13.51□□□□□ -0.25
LRRC28Q86X40 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC13.51□□□□□ -0.25
LRRC28Q86X40 WDR53-203ENST00000429115 683 ntTSL 2 BASIC13.51□□□□□ -0.25
LRRC28Q86X40 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
LRRC28Q86X40 PHKG1P2-201ENST00000457537 863 ntBASIC13.51□□□□□ -0.25
LRRC28Q86X40 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC13.51□□□□□ -0.25
LRRC28Q86X40 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC13.51□□□□□ -0.25
LRRC28Q86X40 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC13.51□□□□□ -0.25
LRRC28Q86X40 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC13.51□□□□□ -0.25
LRRC28Q86X40 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC13.51□□□□□ -0.25
LRRC28Q86X40 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC13.51□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 50.6 ms