Protein–RNA interactions for Protein: Q7RTU7

SCX, Basic helix-loop-helix transcription factor scleraxis, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCXQ7RTU7 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
SCXQ7RTU7 RN7SL837P-201ENST00000463010 287 ntBASIC10.12□□□□□ -0.79
SCXQ7RTU7 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC10.12□□□□□ -0.79
SCXQ7RTU7 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC10.12□□□□□ -0.79
SCXQ7RTU7 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC10.12□□□□□ -0.79
SCXQ7RTU7 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC10.12□□□□□ -0.79
SCXQ7RTU7 NEU3-203ENST00000529024 581 ntTSL 3 BASIC10.12□□□□□ -0.79
SCXQ7RTU7 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC10.12□□□□□ -0.79
SCXQ7RTU7 AC243562.2-201ENST00000561247 970 ntBASIC10.12□□□□□ -0.79
SCXQ7RTU7 CTBP2P3-201ENST00000585629 1255 ntBASIC10.12□□□□□ -0.79
SCXQ7RTU7 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC10.12□□□□□ -0.79
SCXQ7RTU7 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC10.12□□□□□ -0.79
SCXQ7RTU7 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC10.12□□□□□ -0.79
SCXQ7RTU7 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC10.12□□□□□ -0.79
SCXQ7RTU7 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC10.12□□□□□ -0.79
SCXQ7RTU7 JPH3-201ENST00000284262 3985 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
SCXQ7RTU7 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC10.12□□□□□ -0.79
SCXQ7RTU7 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
SCXQ7RTU7 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC10.12□□□□□ -0.79
SCXQ7RTU7 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
SCXQ7RTU7 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
SCXQ7RTU7 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC10.12□□□□□ -0.79
SCXQ7RTU7 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
SCXQ7RTU7 FRMD8-201ENST00000317568 3723 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
SCXQ7RTU7 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC10.12□□□□□ -0.79
SCXQ7RTU7 ATCAY-201ENST00000450849 5070 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
SCXQ7RTU7 PPFIA4-203ENST00000367240 6434 ntAPPRIS P5 TSL 5 BASIC10.12□□□□□ -0.79
SCXQ7RTU7 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
SCXQ7RTU7 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC10.12□□□□□ -0.79
SCXQ7RTU7 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC10.12□□□□□ -0.79
SCXQ7RTU7 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
SCXQ7RTU7 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
SCXQ7RTU7 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC10.12□□□□□ -0.79
SCXQ7RTU7 DAAM2-202ENST00000398904 6224 ntAPPRIS ALT1 TSL 5 BASIC10.12□□□□□ -0.79
SCXQ7RTU7 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
SCXQ7RTU7 FADS2-201ENST00000257261 2964 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
SCXQ7RTU7 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
SCXQ7RTU7 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
SCXQ7RTU7 MYO16-205ENST00000457511 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
SCXQ7RTU7 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
SCXQ7RTU7 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC10.11□□□□□ -0.79
SCXQ7RTU7 ROBO4-201ENST00000306534 4710 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
SCXQ7RTU7 DENND3-202ENST00000424248 4740 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
SCXQ7RTU7 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC10.11□□□□□ -0.79
SCXQ7RTU7 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC10.11□□□□□ -0.79
SCXQ7RTU7 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
SCXQ7RTU7 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC10.11□□□□□ -0.79
SCXQ7RTU7 MEGF11-201ENST00000288745 5707 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
SCXQ7RTU7 THAP2-201ENST00000308086 5719 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
SCXQ7RTU7 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
SCXQ7RTU7 GET4-202ENST00000407192 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
SCXQ7RTU7 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC10.11□□□□□ -0.79
SCXQ7RTU7 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
SCXQ7RTU7 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC10.11□□□□□ -0.79
SCXQ7RTU7 GSE1-201ENST00000253458 7495 ntAPPRIS P3 TSL 5 BASIC10.11□□□□□ -0.79
SCXQ7RTU7 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
SCXQ7RTU7 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
SCXQ7RTU7 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC10.11□□□□□ -0.79
SCXQ7RTU7 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
SCXQ7RTU7 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC10.11□□□□□ -0.79
SCXQ7RTU7 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
SCXQ7RTU7 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
SCXQ7RTU7 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
SCXQ7RTU7 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
SCXQ7RTU7 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
SCXQ7RTU7 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC10.11□□□□□ -0.79
SCXQ7RTU7 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC10.11□□□□□ -0.79
SCXQ7RTU7 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC10.11□□□□□ -0.79
SCXQ7RTU7 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC10.11□□□□□ -0.79
SCXQ7RTU7 AC245100.5-201ENST00000452108 331 ntBASIC10.11□□□□□ -0.79
SCXQ7RTU7 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC10.11□□□□□ -0.79
SCXQ7RTU7 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC10.11□□□□□ -0.79
SCXQ7RTU7 AC104596.2-201ENST00000512793 793 ntBASIC10.11□□□□□ -0.79
SCXQ7RTU7 FADS2-205ENST00000517839 469 ntTSL 3 BASIC10.11□□□□□ -0.79
SCXQ7RTU7 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC10.11□□□□□ -0.79
SCXQ7RTU7 RRP7BP-205ENST00000566851 833 ntBASIC10.11□□□□□ -0.79
SCXQ7RTU7 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC10.11□□□□□ -0.79
SCXQ7RTU7 IFT20-216ENST00000588477 774 ntTSL 5 BASIC10.11□□□□□ -0.79
SCXQ7RTU7 AC017083.2-201ENST00000608069 979 ntBASIC10.11□□□□□ -0.79
SCXQ7RTU7 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC10.11□□□□□ -0.79
SCXQ7RTU7 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
SCXQ7RTU7 IGF2-203ENST00000381395 4527 ntAPPRIS P2 TSL 2 BASIC10.11□□□□□ -0.79
SCXQ7RTU7 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC10.11□□□□□ -0.79
SCXQ7RTU7 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC10.11□□□□□ -0.79
SCXQ7RTU7 KPNA4-201ENST00000334256 8981 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
SCXQ7RTU7 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
SCXQ7RTU7 SFXN3-201ENST00000224807 3089 ntTSL 5 BASIC10.11□□□□□ -0.79
SCXQ7RTU7 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
SCXQ7RTU7 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
SCXQ7RTU7 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC10.11□□□□□ -0.79
SCXQ7RTU7 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC10.11□□□□□ -0.79
SCXQ7RTU7 AL592424.1-201ENST00000563624 1536 ntBASIC10.11□□□□□ -0.79
SCXQ7RTU7 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC10.11□□□□□ -0.79
SCXQ7RTU7 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC10.11□□□□□ -0.79
SCXQ7RTU7 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC10.11□□□□□ -0.79
SCXQ7RTU7 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
SCXQ7RTU7 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
SCXQ7RTU7 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
SCXQ7RTU7 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC10.11□□□□□ -0.79
SCXQ7RTU7 TRIM11-204ENST00000493030 5774 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Retrieved 100 of 98,524 protein–RNA pairs in 10.9 ms