Protein–RNA interactions for Protein: Q29RF7

PDS5A, Sister chromatid cohesion protein PDS5 homolog A, humanhuman

Known RBP Predictions only

Length 1,337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5AQ29RF7 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
PDS5AQ29RF7 MIR769-201ENST00000390225 118 ntBASIC17.89■□□□□ 0.45
PDS5AQ29RF7 AL662890.1-201ENST00000396818 632 ntBASIC17.89■□□□□ 0.45
PDS5AQ29RF7 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC17.89■□□□□ 0.45
PDS5AQ29RF7 AC078875.1-201ENST00000431907 724 ntBASIC17.89■□□□□ 0.45
PDS5AQ29RF7 AC239802.2-201ENST00000532137 554 ntTSL 4 BASIC17.89■□□□□ 0.45
PDS5AQ29RF7 AC104758.2-201ENST00000562716 483 ntTSL 3 BASIC17.89■□□□□ 0.45
PDS5AQ29RF7 PAM16-211ENST00000575848 518 ntTSL 3 BASIC17.89■□□□□ 0.45
PDS5AQ29RF7 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
PDS5AQ29RF7 RN7SL774P-201ENST00000577467 290 ntBASIC17.89■□□□□ 0.45
PDS5AQ29RF7 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PDS5AQ29RF7 PPA1-206ENST00000625364 644 ntTSL 5 BASIC17.89■□□□□ 0.45
PDS5AQ29RF7 AL805961.1-203ENST00000641078 1258 ntBASIC17.89■□□□□ 0.45
PDS5AQ29RF7 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PDS5AQ29RF7 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC17.89■□□□□ 0.45
PDS5AQ29RF7 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
PDS5AQ29RF7 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC17.89■□□□□ 0.45
PDS5AQ29RF7 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
PDS5AQ29RF7 AC103702.1-201ENST00000548801 2630 ntBASIC17.89■□□□□ 0.45
PDS5AQ29RF7 AGAP7P-201ENST00000582299 2062 ntBASIC17.89■□□□□ 0.45
PDS5AQ29RF7 AGAP14-201ENST00000624701 2060 ntBASIC17.89■□□□□ 0.45
PDS5AQ29RF7 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
PDS5AQ29RF7 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
PDS5AQ29RF7 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PDS5AQ29RF7 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC17.89■□□□□ 0.45
PDS5AQ29RF7 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PDS5AQ29RF7 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
PDS5AQ29RF7 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PDS5AQ29RF7 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
PDS5AQ29RF7 SF1-209ENST00000433274 2317 ntTSL 2 BASIC17.88■□□□□ 0.45
PDS5AQ29RF7 API5-203ENST00000455725 2257 ntTSL 2 BASIC17.88■□□□□ 0.45
PDS5AQ29RF7 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC17.88■□□□□ 0.45
PDS5AQ29RF7 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
PDS5AQ29RF7 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC17.88■□□□□ 0.45
PDS5AQ29RF7 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC17.88■□□□□ 0.45
PDS5AQ29RF7 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PDS5AQ29RF7 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
PDS5AQ29RF7 AC245369.1-201ENST00000390634 434 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
PDS5AQ29RF7 SLC16A6P1-201ENST00000413214 1059 ntBASIC17.88■□□□□ 0.45
PDS5AQ29RF7 AC006122.1-201ENST00000493323 440 ntBASIC17.88■□□□□ 0.45
PDS5AQ29RF7 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC17.88■□□□□ 0.45
PDS5AQ29RF7 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC17.88■□□□□ 0.45
PDS5AQ29RF7 CHMP4BP1-201ENST00000556017 588 ntBASIC17.88■□□□□ 0.45
PDS5AQ29RF7 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
PDS5AQ29RF7 AC005962.1-201ENST00000584100 773 ntBASIC17.88■□□□□ 0.45
PDS5AQ29RF7 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC17.88■□□□□ 0.45
PDS5AQ29RF7 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
PDS5AQ29RF7 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC17.88■□□□□ 0.45
PDS5AQ29RF7 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC17.88■□□□□ 0.45
PDS5AQ29RF7 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC17.88■□□□□ 0.45
PDS5AQ29RF7 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC17.88■□□□□ 0.45
PDS5AQ29RF7 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
PDS5AQ29RF7 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PDS5AQ29RF7 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
PDS5AQ29RF7 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
PDS5AQ29RF7 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
PDS5AQ29RF7 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
PDS5AQ29RF7 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PDS5AQ29RF7 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC17.87■□□□□ 0.45
PDS5AQ29RF7 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PDS5AQ29RF7 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PDS5AQ29RF7 KRT8P28-201ENST00000433288 1390 ntBASIC17.87■□□□□ 0.45
PDS5AQ29RF7 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC17.87■□□□□ 0.45
PDS5AQ29RF7 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC17.87■□□□□ 0.45
PDS5AQ29RF7 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
PDS5AQ29RF7 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC17.87■□□□□ 0.45
PDS5AQ29RF7 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
PDS5AQ29RF7 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
PDS5AQ29RF7 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC17.87■□□□□ 0.45
PDS5AQ29RF7 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PDS5AQ29RF7 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PDS5AQ29RF7 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
PDS5AQ29RF7 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
PDS5AQ29RF7 IGLC7-201ENST00000390331 441 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
PDS5AQ29RF7 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
PDS5AQ29RF7 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC17.87■□□□□ 0.45
PDS5AQ29RF7 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC17.87■□□□□ 0.45
PDS5AQ29RF7 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC17.87■□□□□ 0.45
PDS5AQ29RF7 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC17.87■□□□□ 0.45
PDS5AQ29RF7 CLDN11-207ENST00000486975 1139 ntTSL 2 BASIC17.87■□□□□ 0.45
PDS5AQ29RF7 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC17.87■□□□□ 0.45
PDS5AQ29RF7 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC17.87■□□□□ 0.45
PDS5AQ29RF7 MSRB3-209ENST00000540804 884 ntTSL 2 BASIC17.87■□□□□ 0.45
PDS5AQ29RF7 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC17.87■□□□□ 0.45
PDS5AQ29RF7 AC103988.2-201ENST00000561804 725 ntBASIC17.87■□□□□ 0.45
PDS5AQ29RF7 AC110285.1-205ENST00000572301 559 ntTSL 3 BASIC17.87■□□□□ 0.45
PDS5AQ29RF7 AC063977.3-201ENST00000597569 547 ntTSL 4 BASIC17.87■□□□□ 0.45
PDS5AQ29RF7 AL021578.1-201ENST00000613646 709 ntBASIC17.87■□□□□ 0.45
PDS5AQ29RF7 AP001505.2-201ENST00000616815 443 ntBASIC17.87■□□□□ 0.45
PDS5AQ29RF7 AC091812.3-201ENST00000621362 345 ntBASIC17.87■□□□□ 0.45
PDS5AQ29RF7 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC17.87■□□□□ 0.45
PDS5AQ29RF7 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC17.87■□□□□ 0.45
PDS5AQ29RF7 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
PDS5AQ29RF7 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
PDS5AQ29RF7 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PDS5AQ29RF7 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC17.87■□□□□ 0.45
PDS5AQ29RF7 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
PDS5AQ29RF7 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PDS5AQ29RF7 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC17.87■□□□□ 0.45
PDS5AQ29RF7 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC17.86■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms