Protein–RNA interactions for Protein: P98160

HSPG2, Basement membrane-specific heparan sulfate proteoglycan core protein, humanhuman

Predictions only

Length 4,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2P98160 ERAS-202ENST00000636362 826 ntAPPRIS P1 TSL 3 BASIC8.99□□□□□ -0.97
HSPG2P98160 PLSCR1-214ENST00000487389 1443 ntAPPRIS ALT2 TSL 5 BASIC8.99□□□□□ -0.97
HSPG2P98160 CELF4-217ENST00000591282 1461 ntAPPRIS P3 TSL 1 (best) BASIC8.99□□□□□ -0.97
HSPG2P98160 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
HSPG2P98160 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC8.99□□□□□ -0.97
HSPG2P98160 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC8.99□□□□□ -0.97
HSPG2P98160 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC8.99□□□□□ -0.97
HSPG2P98160 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC8.99□□□□□ -0.97
HSPG2P98160 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC8.99□□□□□ -0.97
HSPG2P98160 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
HSPG2P98160 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC8.99□□□□□ -0.97
HSPG2P98160 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC8.99□□□□□ -0.97
HSPG2P98160 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC8.99□□□□□ -0.97
HSPG2P98160 AP2M1-207ENST00000439647 1950 ntAPPRIS ALT1 TSL 2 BASIC8.99□□□□□ -0.97
HSPG2P98160 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC8.99□□□□□ -0.97
HSPG2P98160 TEX33-203ENST00000405091 1149 ntAPPRIS ALT2 TSL 5 BASIC8.99□□□□□ -0.97
HSPG2P98160 OR51A9P-201ENST00000422578 911 ntBASIC8.99□□□□□ -0.97
HSPG2P98160 STAG3L3-203ENST00000436857 1033 ntTSL 2 BASIC8.99□□□□□ -0.97
HSPG2P98160 CMPK1-204ENST00000450808 950 ntTSL 2 BASIC8.99□□□□□ -0.97
HSPG2P98160 WDYHV1-206ENST00000523356 869 ntTSL 3 BASIC8.99□□□□□ -0.97
HSPG2P98160 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC8.99□□□□□ -0.97
HSPG2P98160 BLOC1S1-203ENST00000548925 571 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
HSPG2P98160 LOXL1-AS1-207ENST00000565689 735 ntTSL 3 BASIC8.99□□□□□ -0.97
HSPG2P98160 AP001094.3-201ENST00000580491 616 ntTSL 2 BASIC8.99□□□□□ -0.97
HSPG2P98160 AL135936.1-201ENST00000617956 998 ntTSL 5 BASIC8.99□□□□□ -0.97
HSPG2P98160 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
HSPG2P98160 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC8.99□□□□□ -0.97
HSPG2P98160 COQ4-201ENST00000300452 1548 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
HSPG2P98160 OPN1MW2-201ENST00000369929 1261 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
HSPG2P98160 AP001057.1-201ENST00000437557 799 ntTSL 5 BASIC8.99□□□□□ -0.97
HSPG2P98160 HINT1-205ENST00000508488 703 ntTSL 2 BASIC8.99□□□□□ -0.97
HSPG2P98160 KRT8P1-201ENST00000557533 1207 ntBASIC8.99□□□□□ -0.97
HSPG2P98160 CSAG3-201ENST00000599845 844 ntAPPRIS P5 TSL 1 (best) BASIC8.99□□□□□ -0.97
HSPG2P98160 AL136982.5-201ENST00000605222 294 ntBASIC8.99□□□□□ -0.97
HSPG2P98160 CSAG2-203ENST00000638741 844 ntAPPRIS P5 TSL 1 (best) BASIC8.99□□□□□ -0.97
HSPG2P98160 FDFT1-214ENST00000528812 2013 ntTSL 2 BASIC8.99□□□□□ -0.97
HSPG2P98160 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC8.99□□□□□ -0.97
HSPG2P98160 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC8.99□□□□□ -0.97
HSPG2P98160 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC8.99□□□□□ -0.97
HSPG2P98160 CEP83-AS1-201ENST00000623122 2482 ntBASIC8.99□□□□□ -0.97
HSPG2P98160 ARL1-202ENST00000536227 1322 ntTSL 2 BASIC8.99□□□□□ -0.97
HSPG2P98160 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC8.98□□□□□ -0.97
HSPG2P98160 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC8.98□□□□□ -0.97
HSPG2P98160 PPP1R2P4-201ENST00000424051 595 ntBASIC8.98□□□□□ -0.97
HSPG2P98160 CDK4P1-201ENST00000454213 828 ntBASIC8.98□□□□□ -0.97
HSPG2P98160 AC011247.2-201ENST00000457097 233 ntTSL 4 BASIC8.98□□□□□ -0.97
HSPG2P98160 RN7SL523P-201ENST00000484401 298 ntBASIC8.98□□□□□ -0.97
HSPG2P98160 AC022447.5-201ENST00000504817 392 ntBASIC8.98□□□□□ -0.97
HSPG2P98160 CADM1-221ENST00000612235 1042 ntTSL 5 BASIC8.98□□□□□ -0.97
HSPG2P98160 AC138627.1-201ENST00000641127 1257 ntBASIC8.98□□□□□ -0.97
HSPG2P98160 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
HSPG2P98160 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC8.98□□□□□ -0.97
HSPG2P98160 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
HSPG2P98160 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC8.98□□□□□ -0.97
HSPG2P98160 C22orf42-201ENST00000382097 1363 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
HSPG2P98160 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC8.98□□□□□ -0.97
HSPG2P98160 KRTAP2-3-201ENST00000391418 875 ntAPPRIS P1 BASIC8.98□□□□□ -0.97
HSPG2P98160 KRTAP4-12-201ENST00000394014 1077 ntAPPRIS P1 BASIC8.98□□□□□ -0.97
HSPG2P98160 RN7SL128P-201ENST00000467883 305 ntBASIC8.98□□□□□ -0.97
HSPG2P98160 LINC02063-201ENST00000503415 566 ntTSL 4 BASIC8.98□□□□□ -0.97
HSPG2P98160 NPAS3-209ENST00000551008 1002 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
HSPG2P98160 SHBG-217ENST00000576478 639 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
HSPG2P98160 Metazoa_SRP.210-201ENST00000637921 244 ntBASIC8.98□□□□□ -0.97
HSPG2P98160 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC8.98□□□□□ -0.97
HSPG2P98160 MS4A15-201ENST00000337911 1536 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
HSPG2P98160 SVOPL-202ENST00000419765 1523 ntAPPRIS P1 TSL 5 BASIC8.98□□□□□ -0.97
HSPG2P98160 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC8.98□□□□□ -0.97
HSPG2P98160 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC8.98□□□□□ -0.97
HSPG2P98160 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC8.98□□□□□ -0.97
HSPG2P98160 SVOPL-203ENST00000421622 1653 ntTSL 5 BASIC8.98□□□□□ -0.97
HSPG2P98160 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC8.98□□□□□ -0.97
HSPG2P98160 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC8.98□□□□□ -0.97
HSPG2P98160 OR6S1-201ENST00000320704 996 ntAPPRIS P1 BASIC8.98□□□□□ -0.97
HSPG2P98160 THAP4-203ENST00000402545 833 ntTSL 5 BASIC8.98□□□□□ -0.97
HSPG2P98160 UBE2I-206ENST00000403747 1217 ntAPPRIS P1 TSL 5 BASIC8.98□□□□□ -0.97
HSPG2P98160 AC103563.1-201ENST00000429316 123 ntBASIC8.98□□□□□ -0.97
HSPG2P98160 AC027612.2-201ENST00000436174 1145 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
HSPG2P98160 AP000640.1-201ENST00000525337 879 ntTSL 2 BASIC8.98□□□□□ -0.97
HSPG2P98160 EIF2B1-205ENST00000539951 848 ntTSL 5 BASIC8.98□□□□□ -0.97
HSPG2P98160 AC093510.1-202ENST00000546238 442 ntTSL 3 BASIC8.98□□□□□ -0.97
HSPG2P98160 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC8.98□□□□□ -0.97
HSPG2P98160 IDH3A-213ENST00000559205 566 ntTSL 4 BASIC8.98□□□□□ -0.97
HSPG2P98160 IFITM2-205ENST00000602569 605 ntAPPRIS ALT2 TSL 1 (best) BASIC8.98□□□□□ -0.97
HSPG2P98160 AC245595.2-201ENST00000620141 1144 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
HSPG2P98160 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
HSPG2P98160 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
HSPG2P98160 IL2RG-203ENST00000374202 1534 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
HSPG2P98160 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
HSPG2P98160 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC8.98□□□□□ -0.97
HSPG2P98160 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC8.98□□□□□ -0.97
HSPG2P98160 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC8.98□□□□□ -0.97
HSPG2P98160 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC8.98□□□□□ -0.97
HSPG2P98160 GLRX2-202ENST00000367440 1131 ntAPPRIS P4 TSL 1 (best) BASIC8.98□□□□□ -0.97
HSPG2P98160 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC8.98□□□□□ -0.97
HSPG2P98160 AC025186.1-201ENST00000478174 870 ntBASIC8.98□□□□□ -0.97
HSPG2P98160 AC015795.2-201ENST00000512720 575 ntTSL 3 BASIC8.98□□□□□ -0.97
HSPG2P98160 AL121790.2-202ENST00000556024 363 ntTSL 5 BASIC8.98□□□□□ -0.97
HSPG2P98160 DLK1-205ENST00000556051 469 ntTSL 2 BASIC8.98□□□□□ -0.97
HSPG2P98160 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
HSPG2P98160 AC006504.5-208ENST00000588784 2401 ntBASIC8.98□□□□□ -0.97
Retrieved 100 of 98,524 protein–RNA pairs in 62.8 ms