Protein–RNA interactions for Protein: P78527

PRKDC, DNA-dependent protein kinase catalytic subunit, humanhuman

Known RBP Predictions only

Length 4,128 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDCP78527 AC104964.1-201ENST00000520494 489 ntTSL 2 BASIC10.48□□□□□ -0.73
PRKDCP78527 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC10.48□□□□□ -0.73
PRKDCP78527 EIF2B1-205ENST00000539951 848 ntTSL 5 BASIC10.48□□□□□ -0.73
PRKDCP78527 VENTXP3-201ENST00000546480 773 ntBASIC10.48□□□□□ -0.73
PRKDCP78527 MYL6-215ENST00000549566 685 ntTSL 2 BASIC10.48□□□□□ -0.73
PRKDCP78527 TPST2P1-201ENST00000564073 1102 ntBASIC10.48□□□□□ -0.73
PRKDCP78527 MCM8-AS1-201ENST00000613522 983 ntTSL 2 BASIC10.48□□□□□ -0.73
PRKDCP78527 AC079331.1-201ENST00000623200 1200 ntBASIC10.48□□□□□ -0.73
PRKDCP78527 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
PRKDCP78527 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC10.48□□□□□ -0.73
PRKDCP78527 AC006504.5-208ENST00000588784 2401 ntBASIC10.48□□□□□ -0.73
PRKDCP78527 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
PRKDCP78527 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC10.48□□□□□ -0.73
PRKDCP78527 AC069224.1-201ENST00000566372 1715 ntBASIC10.48□□□□□ -0.73
PRKDCP78527 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC10.48□□□□□ -0.73
PRKDCP78527 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
PRKDCP78527 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC10.48□□□□□ -0.73
PRKDCP78527 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
PRKDCP78527 CPSF4L-202ENST00000397671 1275 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
PRKDCP78527 KRT18P44-201ENST00000416086 1285 ntBASIC10.48□□□□□ -0.73
PRKDCP78527 AC000077.1-201ENST00000420012 953 ntBASIC10.48□□□□□ -0.73
PRKDCP78527 SNRPCP15-201ENST00000424055 192 ntBASIC10.48□□□□□ -0.73
PRKDCP78527 AC027612.2-201ENST00000436174 1145 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
PRKDCP78527 AC111149.2-202ENST00000518355 599 ntTSL 4 BASIC10.48□□□□□ -0.73
PRKDCP78527 AC140912.1-202ENST00000561802 194 ntTSL 3 BASIC10.48□□□□□ -0.73
PRKDCP78527 AC048380.1-201ENST00000589818 465 ntTSL 3 BASIC10.48□□□□□ -0.73
PRKDCP78527 AC245595.2-201ENST00000620141 1144 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
PRKDCP78527 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
PRKDCP78527 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC10.48□□□□□ -0.73
PRKDCP78527 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC10.48□□□□□ -0.73
PRKDCP78527 CLUL1-202ENST00000400606 1943 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
PRKDCP78527 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC10.48□□□□□ -0.73
PRKDCP78527 AC022211.2-201ENST00000585075 2527 ntBASIC10.48□□□□□ -0.73
PRKDCP78527 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
PRKDCP78527 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
PRKDCP78527 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
PRKDCP78527 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC10.48□□□□□ -0.73
PRKDCP78527 MIF4GD-201ENST00000245551 1358 ntTSL 3 BASIC10.48□□□□□ -0.73
PRKDCP78527 KRT8P28-201ENST00000433288 1390 ntBASIC10.48□□□□□ -0.73
PRKDCP78527 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
PRKDCP78527 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
PRKDCP78527 AC006059.1-201ENST00000438017 722 ntTSL 5 BASIC10.48□□□□□ -0.73
PRKDCP78527 CDKN2A-AS1-201ENST00000441769 823 ntBASIC10.48□□□□□ -0.73
PRKDCP78527 PEBP1P3-201ENST00000455475 548 ntBASIC10.48□□□□□ -0.73
PRKDCP78527 CDC37P2-201ENST00000562287 1029 ntBASIC10.48□□□□□ -0.73
PRKDCP78527 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC10.48□□□□□ -0.73
PRKDCP78527 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC10.48□□□□□ -0.73
PRKDCP78527 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
PRKDCP78527 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
PRKDCP78527 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC10.47□□□□□ -0.73
PRKDCP78527 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
PRKDCP78527 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC10.47□□□□□ -0.73
PRKDCP78527 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC10.47□□□□□ -0.73
PRKDCP78527 RNF165-205ENST00000588679 2904 ntBASIC10.47□□□□□ -0.73
PRKDCP78527 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
PRKDCP78527 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC10.47□□□□□ -0.73
PRKDCP78527 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC10.47□□□□□ -0.73
PRKDCP78527 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
PRKDCP78527 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC10.47□□□□□ -0.73
PRKDCP78527 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
PRKDCP78527 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
PRKDCP78527 LXN-201ENST00000264265 1116 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
PRKDCP78527 ECHDC2-201ENST00000358358 1126 ntTSL 2 BASIC10.47□□□□□ -0.73
PRKDCP78527 GNRH2-204ENST00000380347 758 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
PRKDCP78527 AC103563.1-201ENST00000429316 123 ntBASIC10.47□□□□□ -0.73
PRKDCP78527 C11orf45-202ENST00000524878 609 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
PRKDCP78527 AC024405.2-201ENST00000528459 810 ntTSL 5 BASIC10.47□□□□□ -0.73
PRKDCP78527 BOLA3P2-201ENST00000586496 323 ntBASIC10.47□□□□□ -0.73
PRKDCP78527 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC10.47□□□□□ -0.73
PRKDCP78527 GGNBP1-204ENST00000613113 887 ntBASIC10.47□□□□□ -0.73
PRKDCP78527 AL121956.4-201ENST00000629925 581 ntTSL 5 BASIC10.47□□□□□ -0.73
PRKDCP78527 MTUS1-229ENST00000634613 1193 ntTSL 5 BASIC10.47□□□□□ -0.73
PRKDCP78527 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC10.47□□□□□ -0.73
PRKDCP78527 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
PRKDCP78527 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC10.47□□□□□ -0.73
PRKDCP78527 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
PRKDCP78527 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
PRKDCP78527 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
PRKDCP78527 AC127383.1-201ENST00000444697 1800 ntBASIC10.47□□□□□ -0.73
PRKDCP78527 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
PRKDCP78527 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
PRKDCP78527 AC147651.3-201ENST00000429872 731 ntTSL 2 BASIC10.47□□□□□ -0.73
PRKDCP78527 RN7SL672P-201ENST00000474091 317 ntBASIC10.47□□□□□ -0.73
PRKDCP78527 NACA-221ENST00000552540 1074 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
PRKDCP78527 ZFYVE1-206ENST00000555072 1225 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
PRKDCP78527 RORA-AS1-202ENST00000558140 869 ntTSL 2 BASIC10.47□□□□□ -0.73
PRKDCP78527 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC10.47□□□□□ -0.73
PRKDCP78527 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC10.47□□□□□ -0.73
PRKDCP78527 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
PRKDCP78527 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
PRKDCP78527 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
PRKDCP78527 RNF170-202ENST00000319073 1265 ntTSL 2 BASIC10.47□□□□□ -0.73
PRKDCP78527 FAM25A-201ENST00000343959 345 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
PRKDCP78527 NCR1-204ENST00000357397 594 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
PRKDCP78527 OR7E115P-201ENST00000382617 1024 ntBASIC10.47□□□□□ -0.73
PRKDCP78527 SAPCD1-AS1-202ENST00000419679 461 ntTSL 3 BASIC10.47□□□□□ -0.73
PRKDCP78527 AC131235.2-201ENST00000445553 1057 ntBASIC10.47□□□□□ -0.73
PRKDCP78527 SNRPD2P2-201ENST00000473818 333 ntBASIC10.47□□□□□ -0.73
PRKDCP78527 C21orf62-204ENST00000490358 1155 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
PRKDCP78527 RN7SL375P-201ENST00000492442 298 ntBASIC10.47□□□□□ -0.73
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms