Protein–RNA interactions for Protein: P63208

SKP1, S-phase kinase-associated protein 1, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1P63208 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC14.38□□□□□ -0.11
SKP1P63208 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
SKP1P63208 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC14.38□□□□□ -0.11
SKP1P63208 DUX4L47-201ENST00000566374 394 ntBASIC14.38□□□□□ -0.11
SKP1P63208 ORC6-206ENST00000568364 888 ntTSL 5 BASIC14.38□□□□□ -0.11
SKP1P63208 AC145423.3-201ENST00000615987 467 ntBASIC14.38□□□□□ -0.11
SKP1P63208 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC14.38□□□□□ -0.11
SKP1P63208 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
SKP1P63208 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SKP1P63208 FES-204ENST00000414248 2327 ntTSL 2 BASIC14.38□□□□□ -0.11
SKP1P63208 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC14.38□□□□□ -0.11
SKP1P63208 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SKP1P63208 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SKP1P63208 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SKP1P63208 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SKP1P63208 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
SKP1P63208 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
SKP1P63208 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SKP1P63208 AP000845.1-201ENST00000581677 2131 ntBASIC14.38□□□□□ -0.11
SKP1P63208 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
SKP1P63208 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
SKP1P63208 PRELP-201ENST00000343110 5747 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SKP1P63208 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
SKP1P63208 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SKP1P63208 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SKP1P63208 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
SKP1P63208 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
SKP1P63208 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC14.37□□□□□ -0.11
SKP1P63208 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
SKP1P63208 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SKP1P63208 REXO1L5P-201ENST00000622260 2098 ntBASIC14.37□□□□□ -0.11
SKP1P63208 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC14.37□□□□□ -0.11
SKP1P63208 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
SKP1P63208 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SKP1P63208 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
SKP1P63208 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC14.37□□□□□ -0.11
SKP1P63208 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SKP1P63208 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
SKP1P63208 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SKP1P63208 TMEM14DP-201ENST00000422205 345 ntBASIC14.37□□□□□ -0.11
SKP1P63208 AC245100.3-201ENST00000441281 285 ntBASIC14.37□□□□□ -0.11
SKP1P63208 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
SKP1P63208 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC14.37□□□□□ -0.11
SKP1P63208 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC14.37□□□□□ -0.11
SKP1P63208 AC025279.2-201ENST00000569730 653 ntBASIC14.37□□□□□ -0.11
SKP1P63208 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SKP1P63208 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC14.37□□□□□ -0.11
SKP1P63208 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
SKP1P63208 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC14.37□□□□□ -0.11
SKP1P63208 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC14.37□□□□□ -0.11
SKP1P63208 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC14.37□□□□□ -0.11
SKP1P63208 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC14.37□□□□□ -0.11
SKP1P63208 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
SKP1P63208 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC14.37□□□□□ -0.11
SKP1P63208 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SKP1P63208 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
SKP1P63208 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SKP1P63208 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC14.37□□□□□ -0.11
SKP1P63208 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
SKP1P63208 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SKP1P63208 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
SKP1P63208 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SKP1P63208 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SKP1P63208 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SKP1P63208 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC14.37□□□□□ -0.11
SKP1P63208 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC14.37□□□□□ -0.11
SKP1P63208 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC14.37□□□□□ -0.11
SKP1P63208 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC14.37□□□□□ -0.11
SKP1P63208 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SKP1P63208 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SKP1P63208 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SKP1P63208 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SKP1P63208 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
SKP1P63208 RP1L1-202ENST00000382483 7973 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SKP1P63208 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SKP1P63208 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
SKP1P63208 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC14.36□□□□□ -0.11
SKP1P63208 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
SKP1P63208 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SKP1P63208 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SKP1P63208 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SKP1P63208 LAMB2-202ENST00000418109 5674 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SKP1P63208 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
SKP1P63208 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC14.36□□□□□ -0.11
SKP1P63208 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC14.36□□□□□ -0.11
SKP1P63208 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SKP1P63208 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
SKP1P63208 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC14.36□□□□□ -0.11
SKP1P63208 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC14.36□□□□□ -0.11
SKP1P63208 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC14.36□□□□□ -0.11
SKP1P63208 ZBTB12BP-201ENST00000314232 1122 ntBASIC14.36□□□□□ -0.11
SKP1P63208 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
SKP1P63208 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC14.36□□□□□ -0.11
SKP1P63208 AC092933.1-201ENST00000393644 945 ntBASIC14.36□□□□□ -0.11
SKP1P63208 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SKP1P63208 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC14.36□□□□□ -0.11
SKP1P63208 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC14.36□□□□□ -0.11
SKP1P63208 AC106760.1-201ENST00000508690 800 ntBASIC14.36□□□□□ -0.11
SKP1P63208 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC14.36□□□□□ -0.11
SKP1P63208 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC14.36□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 85.3 ms