Protein–RNA interactions for Protein: P52798

EFNA4, Ephrin-A4, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA4P52798 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
EFNA4P52798 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
EFNA4P52798 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC12.61□□□□□ -0.39
EFNA4P52798 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
EFNA4P52798 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC12.61□□□□□ -0.39
EFNA4P52798 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
EFNA4P52798 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
EFNA4P52798 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
EFNA4P52798 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC12.61□□□□□ -0.39
EFNA4P52798 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
EFNA4P52798 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
EFNA4P52798 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
EFNA4P52798 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC12.61□□□□□ -0.39
EFNA4P52798 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
EFNA4P52798 RGS10-202ENST00000369103 804 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
EFNA4P52798 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
EFNA4P52798 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
EFNA4P52798 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC12.61□□□□□ -0.39
EFNA4P52798 RNA5SP423-201ENST00000517127 109 ntBASIC12.61□□□□□ -0.39
EFNA4P52798 AC022217.1-201ENST00000521069 738 ntBASIC12.61□□□□□ -0.39
EFNA4P52798 AC104758.2-201ENST00000562716 483 ntTSL 3 BASIC12.61□□□□□ -0.39
EFNA4P52798 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC12.61□□□□□ -0.39
EFNA4P52798 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC12.61□□□□□ -0.39
EFNA4P52798 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC12.61□□□□□ -0.39
EFNA4P52798 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
EFNA4P52798 C17orf50-202ENST00000604830 477 ntTSL 3 BASIC12.61□□□□□ -0.39
EFNA4P52798 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC12.61□□□□□ -0.39
EFNA4P52798 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC12.61□□□□□ -0.39
EFNA4P52798 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
EFNA4P52798 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
EFNA4P52798 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
EFNA4P52798 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
EFNA4P52798 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC12.61□□□□□ -0.39
EFNA4P52798 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
EFNA4P52798 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
EFNA4P52798 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
EFNA4P52798 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
EFNA4P52798 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
EFNA4P52798 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
EFNA4P52798 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
EFNA4P52798 AC011840.2-201ENST00000563063 1520 ntBASIC12.61□□□□□ -0.39
EFNA4P52798 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC12.61□□□□□ -0.39
EFNA4P52798 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
EFNA4P52798 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
EFNA4P52798 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
EFNA4P52798 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC12.61□□□□□ -0.39
EFNA4P52798 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
EFNA4P52798 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
EFNA4P52798 STRN-202ENST00000379213 2254 ntTSL 5 BASIC12.6□□□□□ -0.39
EFNA4P52798 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
EFNA4P52798 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
EFNA4P52798 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC12.6□□□□□ -0.39
EFNA4P52798 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
EFNA4P52798 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
EFNA4P52798 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
EFNA4P52798 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
EFNA4P52798 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
EFNA4P52798 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
EFNA4P52798 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC12.6□□□□□ -0.39
EFNA4P52798 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
EFNA4P52798 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
EFNA4P52798 AC004899.1-201ENST00000424687 1714 ntBASIC12.6□□□□□ -0.39
EFNA4P52798 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
EFNA4P52798 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC12.6□□□□□ -0.39
EFNA4P52798 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC12.6□□□□□ -0.39
EFNA4P52798 LILRP1-201ENST00000444199 1370 ntBASIC12.6□□□□□ -0.39
EFNA4P52798 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC12.6□□□□□ -0.39
EFNA4P52798 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
EFNA4P52798 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
EFNA4P52798 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
EFNA4P52798 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
EFNA4P52798 SDCCAG3P2-201ENST00000326105 1023 ntBASIC12.6□□□□□ -0.39
EFNA4P52798 RBM38-204ENST00000371219 760 ntTSL 2 BASIC12.6□□□□□ -0.39
EFNA4P52798 AK6-201ENST00000380818 1183 ntTSL 2 BASIC12.6□□□□□ -0.39
EFNA4P52798 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
EFNA4P52798 KNCN-202ENST00000396314 608 ntAPPRIS P3 TSL 4 BASIC12.6□□□□□ -0.39
EFNA4P52798 AC010141.1-201ENST00000411585 623 ntBASIC12.6□□□□□ -0.39
EFNA4P52798 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
EFNA4P52798 AC080129.2-201ENST00000418353 430 ntTSL 3 BASIC12.6□□□□□ -0.39
EFNA4P52798 TLE1P1-201ENST00000422965 589 ntBASIC12.6□□□□□ -0.39
EFNA4P52798 HLA-DPB2-205ENST00000435074 1188 ntBASIC12.6□□□□□ -0.39
EFNA4P52798 SPTLC1P5-201ENST00000450718 252 ntBASIC12.6□□□□□ -0.39
EFNA4P52798 RN7SL769P-201ENST00000469386 295 ntBASIC12.6□□□□□ -0.39
EFNA4P52798 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
EFNA4P52798 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC12.6□□□□□ -0.39
EFNA4P52798 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC12.6□□□□□ -0.39
EFNA4P52798 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC12.6□□□□□ -0.39
EFNA4P52798 AC245884.6-201ENST00000515672 1067 ntBASIC12.6□□□□□ -0.39
EFNA4P52798 SDHD-202ENST00000525291 790 ntTSL 3 BASIC12.6□□□□□ -0.39
EFNA4P52798 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC12.6□□□□□ -0.39
EFNA4P52798 COG4-212ENST00000564653 590 ntTSL 5 BASIC12.6□□□□□ -0.39
EFNA4P52798 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
EFNA4P52798 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
EFNA4P52798 AC005324.6-201ENST00000587972 613 ntBASIC12.6□□□□□ -0.39
EFNA4P52798 AC009955.4-201ENST00000597192 544 ntBASIC12.6□□□□□ -0.39
EFNA4P52798 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC12.6□□□□□ -0.39
EFNA4P52798 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
EFNA4P52798 AP001505.2-201ENST00000616815 443 ntBASIC12.6□□□□□ -0.39
EFNA4P52798 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC12.6□□□□□ -0.39
EFNA4P52798 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC12.6□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 71.7 ms