Protein–RNA interactions for Protein: P35606

COPB2, Coatomer subunit beta', humanhuman

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB2P35606 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
COPB2P35606 C17orf50-202ENST00000604830 477 ntTSL 3 BASIC17.2■□□□□ 0.34
COPB2P35606 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
COPB2P35606 LINC01668-201ENST00000635001 513 ntTSL 4 BASIC17.2■□□□□ 0.34
COPB2P35606 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC17.2■□□□□ 0.34
COPB2P35606 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
COPB2P35606 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
COPB2P35606 AL157414.3-201ENST00000624276 1954 ntBASIC17.2■□□□□ 0.34
COPB2P35606 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
COPB2P35606 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
COPB2P35606 AL137783.1-201ENST00000623494 1896 ntBASIC17.2■□□□□ 0.34
COPB2P35606 AC126177.1-201ENST00000547829 2218 ntBASIC17.2■□□□□ 0.34
COPB2P35606 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
COPB2P35606 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
COPB2P35606 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC17.2■□□□□ 0.34
COPB2P35606 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
COPB2P35606 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC17.2■□□□□ 0.34
COPB2P35606 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
COPB2P35606 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
COPB2P35606 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
COPB2P35606 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
COPB2P35606 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
COPB2P35606 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
COPB2P35606 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
COPB2P35606 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC17.19■□□□□ 0.34
COPB2P35606 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
COPB2P35606 AC092850.2-201ENST00000623821 2697 ntBASIC17.19■□□□□ 0.34
COPB2P35606 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC17.19■□□□□ 0.34
COPB2P35606 AC013268.4-201ENST00000637413 2228 ntBASIC17.19■□□□□ 0.34
COPB2P35606 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
COPB2P35606 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
COPB2P35606 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
COPB2P35606 MAX-201ENST00000246163 897 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
COPB2P35606 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
COPB2P35606 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
COPB2P35606 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
COPB2P35606 PES1-204ENST00000402284 2144 ntTSL 5 BASIC17.19■□□□□ 0.34
COPB2P35606 TLE1P1-201ENST00000422965 589 ntBASIC17.19■□□□□ 0.34
COPB2P35606 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
COPB2P35606 RN7SL720P-201ENST00000488178 304 ntBASIC17.19■□□□□ 0.34
COPB2P35606 MARK2P5-201ENST00000507649 634 ntBASIC17.19■□□□□ 0.34
COPB2P35606 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC17.19■□□□□ 0.34
COPB2P35606 CHMP4BP1-201ENST00000556017 588 ntBASIC17.19■□□□□ 0.34
COPB2P35606 CSH2-206ENST00000560142 749 ntTSL 5 BASIC17.19■□□□□ 0.34
COPB2P35606 AC079328.1-201ENST00000560358 952 ntBASIC17.19■□□□□ 0.34
COPB2P35606 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
COPB2P35606 AC026740.1-201ENST00000607068 791 ntBASIC17.19■□□□□ 0.34
COPB2P35606 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
COPB2P35606 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
COPB2P35606 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC17.19■□□□□ 0.34
COPB2P35606 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC17.19■□□□□ 0.34
COPB2P35606 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC17.19■□□□□ 0.34
COPB2P35606 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC17.19■□□□□ 0.34
COPB2P35606 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
COPB2P35606 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC17.19■□□□□ 0.34
COPB2P35606 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC17.19■□□□□ 0.34
COPB2P35606 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC17.19■□□□□ 0.34
COPB2P35606 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
COPB2P35606 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
COPB2P35606 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
COPB2P35606 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC17.18■□□□□ 0.34
COPB2P35606 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
COPB2P35606 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC17.18■□□□□ 0.34
COPB2P35606 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC17.18■□□□□ 0.34
COPB2P35606 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
COPB2P35606 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
COPB2P35606 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
COPB2P35606 MST1L-201ENST00000442552 2185 ntBASIC17.18■□□□□ 0.34
COPB2P35606 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
COPB2P35606 NPPA-201ENST00000376476 728 ntTSL 3 BASIC17.18■□□□□ 0.34
COPB2P35606 AK6-201ENST00000380818 1183 ntTSL 2 BASIC17.18■□□□□ 0.34
COPB2P35606 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC17.18■□□□□ 0.34
COPB2P35606 MAGEA5-201ENST00000446757 942 ntBASIC17.18■□□□□ 0.34
COPB2P35606 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC17.18■□□□□ 0.34
COPB2P35606 PENK-202ENST00000451791 1029 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
COPB2P35606 RNMTL1P1-201ENST00000454103 560 ntBASIC17.18■□□□□ 0.34
COPB2P35606 RN7SL11P-201ENST00000471305 293 ntBASIC17.18■□□□□ 0.34
COPB2P35606 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC17.18■□□□□ 0.34
COPB2P35606 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC17.18■□□□□ 0.34
COPB2P35606 RN7SL774P-201ENST00000577467 290 ntBASIC17.18■□□□□ 0.34
COPB2P35606 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC17.18■□□□□ 0.34
COPB2P35606 AP000346.4-201ENST00000614827 381 ntBASIC17.18■□□□□ 0.34
COPB2P35606 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC17.18■□□□□ 0.34
COPB2P35606 PLEKHB2-211ENST00000628582 1297 ntTSL 2 BASIC17.18■□□□□ 0.34
COPB2P35606 RETN-203ENST00000629642 400 ntTSL 5 BASIC17.18■□□□□ 0.34
COPB2P35606 AL805961.1-203ENST00000641078 1258 ntBASIC17.18■□□□□ 0.34
COPB2P35606 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
COPB2P35606 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
COPB2P35606 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC17.18■□□□□ 0.34
COPB2P35606 AC009090.5-201ENST00000624886 2285 ntBASIC17.18■□□□□ 0.34
COPB2P35606 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
COPB2P35606 AC004899.1-201ENST00000424687 1714 ntBASIC17.18■□□□□ 0.34
COPB2P35606 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
COPB2P35606 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC17.18■□□□□ 0.34
COPB2P35606 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
COPB2P35606 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
COPB2P35606 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
COPB2P35606 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC17.18■□□□□ 0.34
COPB2P35606 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC17.18■□□□□ 0.34
COPB2P35606 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 53.5 ms