Protein–RNA interactions for Protein: P26045

PTPN3, Tyrosine-protein phosphatase non-receptor type 3, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3P26045 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
PTPN3P26045 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC15.4■□□□□ 0.06
PTPN3P26045 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
PTPN3P26045 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
PTPN3P26045 AL603764.1-201ENST00000636452 321 ntBASIC15.4■□□□□ 0.06
PTPN3P26045 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
PTPN3P26045 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PTPN3P26045 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
PTPN3P26045 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
PTPN3P26045 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PTPN3P26045 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PTPN3P26045 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC15.4■□□□□ 0.06
PTPN3P26045 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PTPN3P26045 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
PTPN3P26045 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
PTPN3P26045 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC15.4■□□□□ 0.06
PTPN3P26045 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
PTPN3P26045 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC15.4■□□□□ 0.06
PTPN3P26045 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
PTPN3P26045 KRT8P35-201ENST00000483942 1338 ntBASIC15.4■□□□□ 0.06
PTPN3P26045 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC15.4■□□□□ 0.06
PTPN3P26045 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PTPN3P26045 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
PTPN3P26045 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PTPN3P26045 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC15.39■□□□□ 0.05
PTPN3P26045 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
PTPN3P26045 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
PTPN3P26045 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
PTPN3P26045 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PTPN3P26045 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC15.39■□□□□ 0.05
PTPN3P26045 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
PTPN3P26045 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PTPN3P26045 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC15.39■□□□□ 0.05
PTPN3P26045 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PTPN3P26045 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC15.39■□□□□ 0.05
PTPN3P26045 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC15.39■□□□□ 0.05
PTPN3P26045 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
PTPN3P26045 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PTPN3P26045 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
PTPN3P26045 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PTPN3P26045 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC15.39■□□□□ 0.05
PTPN3P26045 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
PTPN3P26045 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC15.39■□□□□ 0.05
PTPN3P26045 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC15.39■□□□□ 0.05
PTPN3P26045 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
PTPN3P26045 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
PTPN3P26045 KRT18P25-201ENST00000508931 1278 ntBASIC15.39■□□□□ 0.05
PTPN3P26045 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC15.39■□□□□ 0.05
PTPN3P26045 COX11-202ENST00000571584 1108 ntTSL 2 BASIC15.39■□□□□ 0.05
PTPN3P26045 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC15.39■□□□□ 0.05
PTPN3P26045 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC15.39■□□□□ 0.05
PTPN3P26045 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC15.39■□□□□ 0.05
PTPN3P26045 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PTPN3P26045 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC15.39■□□□□ 0.05
PTPN3P26045 API5-203ENST00000455725 2257 ntTSL 2 BASIC15.39■□□□□ 0.05
PTPN3P26045 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PTPN3P26045 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC15.39■□□□□ 0.05
PTPN3P26045 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC15.39■□□□□ 0.05
PTPN3P26045 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC15.39■□□□□ 0.05
PTPN3P26045 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
PTPN3P26045 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
PTPN3P26045 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
PTPN3P26045 AC113367.3-201ENST00000508316 1912 ntBASIC15.39■□□□□ 0.05
PTPN3P26045 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PTPN3P26045 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
PTPN3P26045 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
PTPN3P26045 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
PTPN3P26045 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
PTPN3P26045 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
PTPN3P26045 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC15.38■□□□□ 0.05
PTPN3P26045 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
PTPN3P26045 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
PTPN3P26045 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
PTPN3P26045 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC15.38■□□□□ 0.05
PTPN3P26045 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
PTPN3P26045 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
PTPN3P26045 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
PTPN3P26045 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
PTPN3P26045 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
PTPN3P26045 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
PTPN3P26045 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
PTPN3P26045 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC15.38■□□□□ 0.05
PTPN3P26045 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
PTPN3P26045 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
PTPN3P26045 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
PTPN3P26045 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC15.38■□□□□ 0.05
PTPN3P26045 AC009486.1-201ENST00000569860 813 ntBASIC15.38■□□□□ 0.05
PTPN3P26045 AC138761.1-201ENST00000584393 385 ntBASIC15.38■□□□□ 0.05
PTPN3P26045 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC15.38■□□□□ 0.05
PTPN3P26045 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
PTPN3P26045 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
PTPN3P26045 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
PTPN3P26045 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
PTPN3P26045 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC15.38■□□□□ 0.05
PTPN3P26045 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC15.38■□□□□ 0.05
PTPN3P26045 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
PTPN3P26045 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC15.38■□□□□ 0.05
PTPN3P26045 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC15.38■□□□□ 0.05
PTPN3P26045 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
PTPN3P26045 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms