Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
COL8A2P25067 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC12.77□□□□□ -0.37
COL8A2P25067 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
COL8A2P25067 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
COL8A2P25067 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
COL8A2P25067 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
COL8A2P25067 POM121L8P-201ENST00000417732 1281 ntBASIC12.77□□□□□ -0.37
COL8A2P25067 AC245100.3-201ENST00000441281 285 ntBASIC12.77□□□□□ -0.37
COL8A2P25067 POM121L9P-203ENST00000441984 1285 ntBASIC12.77□□□□□ -0.37
COL8A2P25067 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC12.77□□□□□ -0.37
COL8A2P25067 HOMER2P2-201ENST00000451621 847 ntBASIC12.77□□□□□ -0.37
COL8A2P25067 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
COL8A2P25067 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC12.77□□□□□ -0.37
COL8A2P25067 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
COL8A2P25067 RIT1-205ENST00000539040 919 ntTSL 2 BASIC12.77□□□□□ -0.37
COL8A2P25067 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC12.77□□□□□ -0.37
COL8A2P25067 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
COL8A2P25067 DUX4L47-201ENST00000566374 394 ntBASIC12.77□□□□□ -0.37
COL8A2P25067 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC12.77□□□□□ -0.37
COL8A2P25067 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC12.77□□□□□ -0.37
COL8A2P25067 AC091271.1-201ENST00000611877 1162 ntBASIC12.77□□□□□ -0.37
COL8A2P25067 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
COL8A2P25067 GPR182-203ENST00000622922 591 ntBASIC12.77□□□□□ -0.37
COL8A2P25067 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
COL8A2P25067 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC12.77□□□□□ -0.37
COL8A2P25067 AC112693.3-201ENST00000624819 1983 ntBASIC12.77□□□□□ -0.37
COL8A2P25067 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
COL8A2P25067 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
COL8A2P25067 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
COL8A2P25067 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
COL8A2P25067 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
COL8A2P25067 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
COL8A2P25067 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
COL8A2P25067 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
COL8A2P25067 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
COL8A2P25067 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
COL8A2P25067 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
COL8A2P25067 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
COL8A2P25067 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
COL8A2P25067 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
COL8A2P25067 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.37
COL8A2P25067 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
COL8A2P25067 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC12.76□□□□□ -0.37
COL8A2P25067 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC12.76□□□□□ -0.37
COL8A2P25067 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
COL8A2P25067 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
COL8A2P25067 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC12.76□□□□□ -0.37
COL8A2P25067 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC12.76□□□□□ -0.37
COL8A2P25067 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
COL8A2P25067 REXO1L4P-201ENST00000605109 1937 ntBASIC12.76□□□□□ -0.37
COL8A2P25067 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
COL8A2P25067 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
COL8A2P25067 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
COL8A2P25067 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC12.76□□□□□ -0.37
COL8A2P25067 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
COL8A2P25067 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
COL8A2P25067 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
COL8A2P25067 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC12.76□□□□□ -0.37
COL8A2P25067 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
COL8A2P25067 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
COL8A2P25067 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC12.76□□□□□ -0.37
COL8A2P25067 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
COL8A2P25067 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
COL8A2P25067 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
COL8A2P25067 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
COL8A2P25067 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
COL8A2P25067 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC12.76□□□□□ -0.37
COL8A2P25067 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC12.76□□□□□ -0.37
COL8A2P25067 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC12.76□□□□□ -0.37
COL8A2P25067 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
COL8A2P25067 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC12.76□□□□□ -0.37
COL8A2P25067 PFN1P12-201ENST00000455938 534 ntBASIC12.76□□□□□ -0.37
COL8A2P25067 AC022494.1-201ENST00000466044 728 ntBASIC12.76□□□□□ -0.37
COL8A2P25067 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC12.76□□□□□ -0.37
COL8A2P25067 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC12.76□□□□□ -0.37
COL8A2P25067 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC12.76□□□□□ -0.37
COL8A2P25067 MIR4525-201ENST00000580000 75 ntBASIC12.76□□□□□ -0.37
COL8A2P25067 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC12.76□□□□□ -0.37
COL8A2P25067 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC12.76□□□□□ -0.37
COL8A2P25067 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
COL8A2P25067 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
COL8A2P25067 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
COL8A2P25067 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC12.76□□□□□ -0.37
COL8A2P25067 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
COL8A2P25067 AC012508.2-201ENST00000567613 1472 ntBASIC12.76□□□□□ -0.37
COL8A2P25067 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
COL8A2P25067 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
COL8A2P25067 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC12.76□□□□□ -0.37
COL8A2P25067 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
COL8A2P25067 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC12.76□□□□□ -0.37
COL8A2P25067 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
COL8A2P25067 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
COL8A2P25067 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
COL8A2P25067 AC007686.3-201ENST00000619017 3487 ntBASIC12.76□□□□□ -0.37
COL8A2P25067 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC12.76□□□□□ -0.37
COL8A2P25067 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC12.76□□□□□ -0.37
COL8A2P25067 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC12.76□□□□□ -0.37
COL8A2P25067 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC12.76□□□□□ -0.37
COL8A2P25067 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC12.76□□□□□ -0.37
COL8A2P25067 CELP-203ENST00000624767 2414 ntTSL 5 BASIC12.76□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms