Protein–RNA interactions for Protein: P19256

CD58, Lymphocyte function-associated antigen 3, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD58P19256 AC055811.4-201ENST00000624039 1754 ntBASIC16.26■□□□□ 0.19
CD58P19256 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC16.26■□□□□ 0.19
CD58P19256 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CD58P19256 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
CD58P19256 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CD58P19256 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CD58P19256 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC16.25■□□□□ 0.19
CD58P19256 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC16.25■□□□□ 0.19
CD58P19256 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC16.25■□□□□ 0.19
CD58P19256 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC16.25■□□□□ 0.19
CD58P19256 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
CD58P19256 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CD58P19256 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
CD58P19256 AP001889.1-201ENST00000525414 633 ntBASIC16.25■□□□□ 0.19
CD58P19256 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CD58P19256 SLC25A47P1-201ENST00000531577 414 ntBASIC16.25■□□□□ 0.19
CD58P19256 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC16.25■□□□□ 0.19
CD58P19256 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC16.25■□□□□ 0.19
CD58P19256 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC16.25■□□□□ 0.19
CD58P19256 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC16.25■□□□□ 0.19
CD58P19256 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC16.25■□□□□ 0.19
CD58P19256 AC015936.2-201ENST00000593177 259 ntBASIC16.25■□□□□ 0.19
CD58P19256 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CD58P19256 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CD58P19256 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CD58P19256 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CD58P19256 AL136379.1-201ENST00000623471 2642 ntBASIC16.25■□□□□ 0.19
CD58P19256 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CD58P19256 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CD58P19256 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CD58P19256 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
CD58P19256 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CD58P19256 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CD58P19256 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC16.25■□□□□ 0.19
CD58P19256 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
CD58P19256 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CD58P19256 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC16.25■□□□□ 0.19
CD58P19256 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CD58P19256 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC16.24■□□□□ 0.19
CD58P19256 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CD58P19256 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC16.24■□□□□ 0.19
CD58P19256 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
CD58P19256 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CD58P19256 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
CD58P19256 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CD58P19256 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CD58P19256 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CD58P19256 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CD58P19256 AC099063.4-201ENST00000641099 1602 ntBASIC16.24■□□□□ 0.19
CD58P19256 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CD58P19256 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CD58P19256 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CD58P19256 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
CD58P19256 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
CD58P19256 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
CD58P19256 ACTBP8-201ENST00000403258 1108 ntBASIC16.24■□□□□ 0.19
CD58P19256 PGF-202ENST00000405431 666 ntTSL 5 BASIC16.24■□□□□ 0.19
CD58P19256 EIF3FP3-201ENST00000434851 1086 ntBASIC16.24■□□□□ 0.19
CD58P19256 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC16.24■□□□□ 0.19
CD58P19256 AL355864.2-201ENST00000447420 863 ntBASIC16.24■□□□□ 0.19
CD58P19256 GAPDHP21-201ENST00000450301 1010 ntBASIC16.24■□□□□ 0.19
CD58P19256 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CD58P19256 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC16.24■□□□□ 0.19
CD58P19256 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC16.24■□□□□ 0.19
CD58P19256 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CD58P19256 USP32P1-208ENST00000506594 1164 ntBASIC16.24■□□□□ 0.19
CD58P19256 AC022616.1-201ENST00000518688 554 ntBASIC16.24■□□□□ 0.19
CD58P19256 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CD58P19256 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CD58P19256 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC16.24■□□□□ 0.19
CD58P19256 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC16.24■□□□□ 0.19
CD58P19256 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC16.24■□□□□ 0.19
CD58P19256 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
CD58P19256 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC16.24■□□□□ 0.19
CD58P19256 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC16.24■□□□□ 0.19
CD58P19256 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC16.24■□□□□ 0.19
CD58P19256 AC145423.3-201ENST00000615987 467 ntBASIC16.24■□□□□ 0.19
CD58P19256 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CD58P19256 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CD58P19256 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CD58P19256 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC16.24■□□□□ 0.19
CD58P19256 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC16.24■□□□□ 0.19
CD58P19256 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CD58P19256 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CD58P19256 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CD58P19256 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CD58P19256 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC16.24■□□□□ 0.19
CD58P19256 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
CD58P19256 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CD58P19256 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CD58P19256 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC16.23■□□□□ 0.19
CD58P19256 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CD58P19256 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
CD58P19256 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CD58P19256 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CD58P19256 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CD58P19256 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CD58P19256 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
CD58P19256 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CD58P19256 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms