Protein–RNA interactions for Protein: P0C6S8

LINGO3, Leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 3, humanhuman

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINGO3P0C6S8 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
LINGO3P0C6S8 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
LINGO3P0C6S8 SNHG28-201ENST00000368102 2501 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
LINGO3P0C6S8 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
LINGO3P0C6S8 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
LINGO3P0C6S8 ZMIZ1-AS1-203ENST00000456353 2878 ntTSL 2 BASIC14.72□□□□□ -0.05
LINGO3P0C6S8 AAR2-202ENST00000373932 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
LINGO3P0C6S8 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
LINGO3P0C6S8 RUNX3-203ENST00000399916 4340 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
LINGO3P0C6S8 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
LINGO3P0C6S8 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC14.72□□□□□ -0.05
LINGO3P0C6S8 ATP13A1-202ENST00000357324 3861 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
LINGO3P0C6S8 GID4-201ENST00000268719 4237 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
LINGO3P0C6S8 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
LINGO3P0C6S8 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
LINGO3P0C6S8 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
LINGO3P0C6S8 AL139400.1-201ENST00000366220 510 ntBASIC14.72□□□□□ -0.05
LINGO3P0C6S8 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC14.72□□□□□ -0.05
LINGO3P0C6S8 TSEN15P1-201ENST00000423257 515 ntBASIC14.72□□□□□ -0.05
LINGO3P0C6S8 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC14.72□□□□□ -0.05
LINGO3P0C6S8 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
LINGO3P0C6S8 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC14.72□□□□□ -0.05
LINGO3P0C6S8 DAD1-205ENST00000543337 501 ntTSL 3 BASIC14.72□□□□□ -0.05
LINGO3P0C6S8 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC14.72□□□□□ -0.05
LINGO3P0C6S8 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC14.72□□□□□ -0.05
LINGO3P0C6S8 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
LINGO3P0C6S8 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC14.72□□□□□ -0.05
LINGO3P0C6S8 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC14.72□□□□□ -0.05
LINGO3P0C6S8 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC14.72□□□□□ -0.05
LINGO3P0C6S8 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
LINGO3P0C6S8 AP001059.3-201ENST00000619053 235 ntBASIC14.72□□□□□ -0.05
LINGO3P0C6S8 ARHGAP45-202ENST00000539243 4184 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
LINGO3P0C6S8 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC14.72□□□□□ -0.05
LINGO3P0C6S8 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
LINGO3P0C6S8 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
LINGO3P0C6S8 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
LINGO3P0C6S8 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
LINGO3P0C6S8 WDR17-205ENST00000508596 4294 ntAPPRIS ALT1 TSL 1 (best) BASIC14.72□□□□□ -0.05
LINGO3P0C6S8 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
LINGO3P0C6S8 NDRG4-221ENST00000563799 3014 ntAPPRIS ALT1 TSL 2 BASIC14.72□□□□□ -0.05
LINGO3P0C6S8 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC14.72□□□□□ -0.05
LINGO3P0C6S8 MED22-209ENST00000610888 3867 ntAPPRIS ALT1 TSL 1 (best) BASIC14.72□□□□□ -0.05
LINGO3P0C6S8 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
LINGO3P0C6S8 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
LINGO3P0C6S8 ACIN1-202ENST00000338631 2445 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
LINGO3P0C6S8 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC14.72□□□□□ -0.05
LINGO3P0C6S8 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
LINGO3P0C6S8 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC14.71□□□□□ -0.05
LINGO3P0C6S8 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
LINGO3P0C6S8 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
LINGO3P0C6S8 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
LINGO3P0C6S8 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
LINGO3P0C6S8 PPP1R13L-201ENST00000360957 3104 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
LINGO3P0C6S8 BIRC5-202ENST00000350051 2630 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
LINGO3P0C6S8 C19orf44-203ENST00000594035 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
LINGO3P0C6S8 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
LINGO3P0C6S8 STRN-202ENST00000379213 2254 ntTSL 5 BASIC14.71□□□□□ -0.05
LINGO3P0C6S8 PHF2-203ENST00000610682 2921 ntTSL 5 BASIC14.71□□□□□ -0.05
LINGO3P0C6S8 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
LINGO3P0C6S8 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
LINGO3P0C6S8 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
LINGO3P0C6S8 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
LINGO3P0C6S8 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC14.71□□□□□ -0.05
LINGO3P0C6S8 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC14.71□□□□□ -0.05
LINGO3P0C6S8 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC14.71□□□□□ -0.05
LINGO3P0C6S8 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
LINGO3P0C6S8 AL512356.2-201ENST00000546955 174 ntBASIC14.71□□□□□ -0.05
LINGO3P0C6S8 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC14.71□□□□□ -0.05
LINGO3P0C6S8 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC14.71□□□□□ -0.05
LINGO3P0C6S8 LINC00628-201ENST00000628516 1289 ntBASIC14.71□□□□□ -0.05
LINGO3P0C6S8 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC14.71□□□□□ -0.05
LINGO3P0C6S8 AC007663.2-201ENST00000506039 2228 ntTSL 2 BASIC14.71□□□□□ -0.05
LINGO3P0C6S8 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
LINGO3P0C6S8 AL691432.1-201ENST00000596308 1422 ntBASIC14.71□□□□□ -0.05
LINGO3P0C6S8 ARMC5-201ENST00000268314 3612 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
LINGO3P0C6S8 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC14.71□□□□□ -0.05
LINGO3P0C6S8 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
LINGO3P0C6S8 SLC4A7-214ENST00000455077 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
LINGO3P0C6S8 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC14.71□□□□□ -0.05
LINGO3P0C6S8 GNAS-213ENST00000371099 3709 ntTSL 5 BASIC14.71□□□□□ -0.05
LINGO3P0C6S8 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
LINGO3P0C6S8 IL1RL2-201ENST00000264257 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
LINGO3P0C6S8 AGBL2-205ENST00000528244 2929 ntAPPRIS ALT2 TSL 2 BASIC14.71□□□□□ -0.06
LINGO3P0C6S8 ABCB9-203ENST00000346530 3399 ntTSL 5 BASIC14.71□□□□□ -0.06
LINGO3P0C6S8 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC14.71□□□□□ -0.06
LINGO3P0C6S8 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
LINGO3P0C6S8 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
LINGO3P0C6S8 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC14.71□□□□□ -0.06
LINGO3P0C6S8 AC027288.3-202ENST00000550268 1820 ntTSL 2 BASIC14.71□□□□□ -0.06
LINGO3P0C6S8 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC14.71□□□□□ -0.06
LINGO3P0C6S8 C19orf66-202ENST00000397881 2140 ntAPPRIS ALT2 TSL 2 BASIC14.71□□□□□ -0.06
LINGO3P0C6S8 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC14.71□□□□□ -0.06
LINGO3P0C6S8 TTC14-202ENST00000382584 2274 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
LINGO3P0C6S8 CENPBD1-201ENST00000314994 2744 ntAPPRIS P1 BASIC14.71□□□□□ -0.06
LINGO3P0C6S8 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.06
LINGO3P0C6S8 MFSD2B-201ENST00000338315 2850 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.06
LINGO3P0C6S8 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
LINGO3P0C6S8 SLC25A26-202ENST00000354883 2673 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
LINGO3P0C6S8 MSH5-202ENST00000375740 2669 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
LINGO3P0C6S8 TKT-202ENST00000423516 2075 ntTSL 2 BASIC14.7□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms