Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
HOXC6P09630 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC16.87■□□□□ 0.29
HOXC6P09630 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
HOXC6P09630 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
HOXC6P09630 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
HOXC6P09630 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
HOXC6P09630 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC16.87■□□□□ 0.29
HOXC6P09630 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
HOXC6P09630 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
HOXC6P09630 AC020658.6-201ENST00000623564 1870 ntBASIC16.87■□□□□ 0.29
HOXC6P09630 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
HOXC6P09630 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC16.87■□□□□ 0.29
HOXC6P09630 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
HOXC6P09630 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
HOXC6P09630 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC16.87■□□□□ 0.29
HOXC6P09630 IL9-201ENST00000274520 591 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
HOXC6P09630 AC012360.1-201ENST00000433219 674 ntTSL 5 BASIC16.87■□□□□ 0.29
HOXC6P09630 AL157407.1-201ENST00000435784 904 ntBASIC16.87■□□□□ 0.29
HOXC6P09630 AC078991.1-201ENST00000437297 610 ntBASIC16.87■□□□□ 0.29
HOXC6P09630 TMEM218-205ENST00000527271 706 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
HOXC6P09630 NDUFC2-KCTD14-202ENST00000530054 656 ntAPPRIS P3 TSL 2 BASIC16.87■□□□□ 0.29
HOXC6P09630 FKBP11-212ENST00000552878 1052 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
HOXC6P09630 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC16.87■□□□□ 0.29
HOXC6P09630 AC136475.1-202ENST00000602429 1151 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
HOXC6P09630 AL157813.1-201ENST00000612996 587 ntBASIC16.87■□□□□ 0.29
HOXC6P09630 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC16.87■□□□□ 0.29
HOXC6P09630 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
HOXC6P09630 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
HOXC6P09630 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
HOXC6P09630 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC16.87■□□□□ 0.29
HOXC6P09630 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC16.87■□□□□ 0.29
HOXC6P09630 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
HOXC6P09630 FAM90A2P-201ENST00000511144 1395 ntBASIC16.87■□□□□ 0.29
HOXC6P09630 FAM90A25P-201ENST00000528404 1395 ntBASIC16.87■□□□□ 0.29
HOXC6P09630 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
HOXC6P09630 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
HOXC6P09630 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
HOXC6P09630 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
HOXC6P09630 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
HOXC6P09630 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
HOXC6P09630 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
HOXC6P09630 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC16.86■□□□□ 0.29
HOXC6P09630 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
HOXC6P09630 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
HOXC6P09630 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC16.86■□□□□ 0.29
HOXC6P09630 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
HOXC6P09630 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
HOXC6P09630 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
HOXC6P09630 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC16.86■□□□□ 0.29
HOXC6P09630 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
HOXC6P09630 SLC35G2-201ENST00000393079 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
HOXC6P09630 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC16.86■□□□□ 0.29
HOXC6P09630 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
HOXC6P09630 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
HOXC6P09630 API5-202ENST00000420461 2009 ntTSL 2 BASIC16.86■□□□□ 0.29
HOXC6P09630 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC16.86■□□□□ 0.29
HOXC6P09630 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
HOXC6P09630 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
HOXC6P09630 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC16.86■□□□□ 0.29
HOXC6P09630 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
HOXC6P09630 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
HOXC6P09630 ZDHHC4-201ENST00000335965 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
HOXC6P09630 MUC1-203ENST00000342482 537 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
HOXC6P09630 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC16.86■□□□□ 0.29
HOXC6P09630 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
HOXC6P09630 OR2K2-202ENST00000374428 1038 ntBASIC16.86■□□□□ 0.29
HOXC6P09630 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
HOXC6P09630 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
HOXC6P09630 PIK3IP1-202ENST00000402249 999 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
HOXC6P09630 AL355334.1-201ENST00000417713 215 ntBASIC16.86■□□□□ 0.29
HOXC6P09630 IDI2-AS1-201ENST00000420381 672 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
HOXC6P09630 CHID1-202ENST00000429789 1289 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
HOXC6P09630 HCFC1-AS1-201ENST00000438219 350 ntTSL 3 BASIC16.86■□□□□ 0.29
HOXC6P09630 PFN2-206ENST00000461930 606 ntTSL 4 BASIC16.86■□□□□ 0.29
HOXC6P09630 AC130709.1-201ENST00000484779 1212 ntBASIC16.86■□□□□ 0.29
HOXC6P09630 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC16.86■□□□□ 0.29
HOXC6P09630 RN7SL67P-201ENST00000492147 296 ntBASIC16.86■□□□□ 0.29
HOXC6P09630 TVP23C-205ENST00000518321 1080 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
HOXC6P09630 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC16.86■□□□□ 0.29
HOXC6P09630 CFL1-206ENST00000527344 962 ntTSL 2 BASIC16.86■□□□□ 0.29
HOXC6P09630 UBE3B-206ENST00000536398 1120 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
HOXC6P09630 REC114-202ENST00000560581 833 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
HOXC6P09630 DNM1P30-201ENST00000563586 452 ntBASIC16.86■□□□□ 0.29
HOXC6P09630 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
HOXC6P09630 IMPA2-207ENST00000588927 787 ntTSL 5 BASIC16.86■□□□□ 0.29
HOXC6P09630 AC138894.2-201ENST00000602838 371 ntBASIC16.86■□□□□ 0.29
HOXC6P09630 MEG3_2.1-201ENST00000611456 105 ntBASIC16.86■□□□□ 0.29
HOXC6P09630 CUTA-215ENST00000611509 1199 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
HOXC6P09630 ZCCHC17-204ENST00000546109 1705 ntTSL 2 BASIC16.86■□□□□ 0.29
HOXC6P09630 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC16.86■□□□□ 0.29
HOXC6P09630 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC16.86■□□□□ 0.29
HOXC6P09630 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC16.86■□□□□ 0.29
HOXC6P09630 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
HOXC6P09630 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
HOXC6P09630 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
HOXC6P09630 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC16.86■□□□□ 0.29
HOXC6P09630 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
HOXC6P09630 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
HOXC6P09630 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
HOXC6P09630 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms