Protein–RNA interactions for Protein: O95170

CDRT1, CMT1A duplicated region transcript 1 protein, humanhuman

Predictions only

Length 752 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1O95170 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC13.56□□□□□ -0.24
CDRT1O95170 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC13.56□□□□□ -0.24
CDRT1O95170 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
CDRT1O95170 SNAP29-201ENST00000215730 4287 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CDRT1O95170 HNRNPH1-204ENST00000442819 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CDRT1O95170 ACSM2A-209ENST00000573854 2837 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CDRT1O95170 OPRL1-203ENST00000355631 3147 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CDRT1O95170 SELENON-202ENST00000361547 4334 ntAPPRIS P4 TSL 1 (best) BASIC13.56□□□□□ -0.24
CDRT1O95170 SF1-201ENST00000227503 2850 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
CDRT1O95170 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CDRT1O95170 PELP1-202ENST00000436683 3524 ntTSL 2 BASIC13.56□□□□□ -0.24
CDRT1O95170 TRIM10-204ENST00000449742 3546 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CDRT1O95170 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC13.56□□□□□ -0.24
CDRT1O95170 CILP2-201ENST00000291495 4199 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
CDRT1O95170 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CDRT1O95170 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CDRT1O95170 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CDRT1O95170 HES2-201ENST00000377834 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CDRT1O95170 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
CDRT1O95170 WDR17-205ENST00000508596 4294 ntAPPRIS ALT1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CDRT1O95170 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
CDRT1O95170 CSPG4P12-202ENST00000559989 7790 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CDRT1O95170 RUNX3-203ENST00000399916 4340 ntAPPRIS ALT2 TSL 2 BASIC13.55□□□□□ -0.24
CDRT1O95170 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC13.55□□□□□ -0.24
CDRT1O95170 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CDRT1O95170 BICDL2-204ENST00000573514 3519 ntTSL 2 BASIC13.55□□□□□ -0.24
CDRT1O95170 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CDRT1O95170 B3GNT4-202ENST00000535274 2938 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
CDRT1O95170 HCFC2-201ENST00000229330 5734 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CDRT1O95170 ATG14-201ENST00000247178 4742 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CDRT1O95170 AC007787.1-201ENST00000588095 1583 ntBASIC13.55□□□□□ -0.24
CDRT1O95170 GUF1-201ENST00000281543 4449 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CDRT1O95170 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CDRT1O95170 ADAMTS10-201ENST00000270328 4194 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
CDRT1O95170 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC13.55□□□□□ -0.24
CDRT1O95170 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC13.55□□□□□ -0.24
CDRT1O95170 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CDRT1O95170 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC13.55□□□□□ -0.24
CDRT1O95170 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CDRT1O95170 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CDRT1O95170 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CDRT1O95170 FAM220BP-201ENST00000377689 816 ntBASIC13.55□□□□□ -0.24
CDRT1O95170 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CDRT1O95170 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC13.55□□□□□ -0.24
CDRT1O95170 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC13.55□□□□□ -0.24
CDRT1O95170 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC13.55□□□□□ -0.24
CDRT1O95170 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC13.55□□□□□ -0.24
CDRT1O95170 AL139010.1-201ENST00000454878 894 ntBASIC13.55□□□□□ -0.24
CDRT1O95170 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC13.55□□□□□ -0.24
CDRT1O95170 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC13.55□□□□□ -0.24
CDRT1O95170 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC13.55□□□□□ -0.24
CDRT1O95170 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC13.55□□□□□ -0.24
CDRT1O95170 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
CDRT1O95170 AC027601.4-201ENST00000611259 610 ntBASIC13.55□□□□□ -0.24
CDRT1O95170 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC13.55□□□□□ -0.24
CDRT1O95170 ADAM33-201ENST00000350009 3480 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
CDRT1O95170 KIFC3-202ENST00000421376 3128 ntTSL 2 BASIC13.55□□□□□ -0.24
CDRT1O95170 AGRN-210ENST00000620552 7394 ntTSL 5 BASIC13.55□□□□□ -0.24
CDRT1O95170 ZNF800-203ENST00000393313 4358 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
CDRT1O95170 SERTAD2-201ENST00000313349 5549 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CDRT1O95170 AC005324.3-201ENST00000455584 5514 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
CDRT1O95170 FFAR4-201ENST00000371481 3605 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CDRT1O95170 PML-203ENST00000354026 2885 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
CDRT1O95170 LILRB5-203ENST00000449561 2137 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
CDRT1O95170 PRR12-203ENST00000615927 4479 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
CDRT1O95170 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
CDRT1O95170 CC2D1B-201ENST00000284376 3377 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
CDRT1O95170 CNTN1-203ENST00000547702 3033 ntTSL 2 BASIC13.55□□□□□ -0.24
CDRT1O95170 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC13.55□□□□□ -0.24
CDRT1O95170 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CDRT1O95170 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
CDRT1O95170 AP4B1-201ENST00000256658 2742 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CDRT1O95170 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
CDRT1O95170 XG-201ENST00000381174 2315 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
CDRT1O95170 LDB3-209ENST00000623056 2314 ntTSL 5 BASIC13.55□□□□□ -0.24
CDRT1O95170 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
CDRT1O95170 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC13.54□□□□□ -0.24
CDRT1O95170 REXO1L4P-201ENST00000605109 1937 ntBASIC13.54□□□□□ -0.24
CDRT1O95170 VTI1B-204ENST00000554659 5351 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CDRT1O95170 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
CDRT1O95170 AFDN-211ENST00000447894 5475 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
CDRT1O95170 DAGLB-201ENST00000297056 2897 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CDRT1O95170 MED12L-202ENST00000309237 2862 ntAPPRIS ALT2 TSL 2 BASIC13.54□□□□□ -0.24
CDRT1O95170 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
CDRT1O95170 REV1-202ENST00000393445 4686 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CDRT1O95170 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CDRT1O95170 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC13.54□□□□□ -0.24
CDRT1O95170 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC13.54□□□□□ -0.24
CDRT1O95170 CAMK2B-217ENST00000457475 4142 ntTSL 5 BASIC13.54□□□□□ -0.24
CDRT1O95170 WASHC2C-201ENST00000336378 4669 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
CDRT1O95170 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CDRT1O95170 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CDRT1O95170 GOLGA8VP-201ENST00000559009 1798 ntBASIC13.54□□□□□ -0.24
CDRT1O95170 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CDRT1O95170 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
CDRT1O95170 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC13.54□□□□□ -0.24
CDRT1O95170 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CDRT1O95170 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CDRT1O95170 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CDRT1O95170 AC023274.1-201ENST00000418278 595 ntBASIC13.54□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms