Protein–RNA interactions for Protein: H3BVE0

BOLA2-SMG1P6, BOLA2-SMG1P6 readthrough (Fragment), humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BOLA2-SMG1P6H3BVE0 TMPRSS7-201ENST00000419127 2317 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
BOLA2-SMG1P6H3BVE0 ATXN2L-201ENST00000325215 3788 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
BOLA2-SMG1P6H3BVE0 NRG1-201ENST00000287842 2035 ntAPPRIS P4 TSL 1 (best) BASIC13.22□□□□□ -0.29
BOLA2-SMG1P6H3BVE0 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC13.22□□□□□ -0.29
BOLA2-SMG1P6H3BVE0 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
BOLA2-SMG1P6H3BVE0 WNT9A-201ENST00000272164 3971 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
BOLA2-SMG1P6H3BVE0 DUOXA1-205ENST00000558422 1678 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
BOLA2-SMG1P6H3BVE0 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
BOLA2-SMG1P6H3BVE0 LGR6-203ENST00000367278 3567 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
BOLA2-SMG1P6H3BVE0 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
BOLA2-SMG1P6H3BVE0 LITAF-221ENST00000622633 2467 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
BOLA2-SMG1P6H3BVE0 KCNK10-202ENST00000319231 2725 ntAPPRIS P4 TSL 1 (best) BASIC13.21□□□□□ -0.29
BOLA2-SMG1P6H3BVE0 GNPDA1-210ENST00000508177 2980 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
BOLA2-SMG1P6H3BVE0 BRWD1-201ENST00000333229 10141 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
BOLA2-SMG1P6H3BVE0 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
BOLA2-SMG1P6H3BVE0 POLG-202ENST00000442287 4487 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
BOLA2-SMG1P6H3BVE0 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC13.21□□□□□ -0.29
BOLA2-SMG1P6H3BVE0 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC13.21□□□□□ -0.29
BOLA2-SMG1P6H3BVE0 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
BOLA2-SMG1P6H3BVE0 HBZP1-201ENST00000354915 429 ntBASIC13.21□□□□□ -0.29
BOLA2-SMG1P6H3BVE0 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC13.21□□□□□ -0.29
BOLA2-SMG1P6H3BVE0 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
BOLA2-SMG1P6H3BVE0 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC13.21□□□□□ -0.29
BOLA2-SMG1P6H3BVE0 AC022447.6-201ENST00000515522 438 ntBASIC13.21□□□□□ -0.29
BOLA2-SMG1P6H3BVE0 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC13.21□□□□□ -0.29
BOLA2-SMG1P6H3BVE0 GPR32P1-201ENST00000601788 811 ntBASIC13.21□□□□□ -0.29
BOLA2-SMG1P6H3BVE0 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC13.21□□□□□ -0.29
BOLA2-SMG1P6H3BVE0 ANKRD20A8P-203ENST00000641373 517 ntBASIC13.21□□□□□ -0.29
BOLA2-SMG1P6H3BVE0 DIS3L2-205ENST00000409401 2048 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
BOLA2-SMG1P6H3BVE0 COL8A1-202ENST00000273342 3029 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
BOLA2-SMG1P6H3BVE0 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.29
BOLA2-SMG1P6H3BVE0 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
BOLA2-SMG1P6H3BVE0 EPN2-202ENST00000347697 4664 ntAPPRIS ALT1 TSL 5 BASIC13.21□□□□□ -0.3
BOLA2-SMG1P6H3BVE0 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
BOLA2-SMG1P6H3BVE0 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC13.21□□□□□ -0.3
BOLA2-SMG1P6H3BVE0 RNF219-AS1-209ENST00000606429 2418 ntTSL 2 BASIC13.21□□□□□ -0.3
BOLA2-SMG1P6H3BVE0 CELF1-201ENST00000310513 4583 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.3
BOLA2-SMG1P6H3BVE0 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.3
BOLA2-SMG1P6H3BVE0 PLEKHB2-202ENST00000403716 4349 ntTSL 3 BASIC13.21□□□□□ -0.3
BOLA2-SMG1P6H3BVE0 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
BOLA2-SMG1P6H3BVE0 UMODL1-206ENST00000408989 5262 ntAPPRIS P4 TSL 1 (best) BASIC13.21□□□□□ -0.3
BOLA2-SMG1P6H3BVE0 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
BOLA2-SMG1P6H3BVE0 AFDN-211ENST00000447894 5475 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.3
BOLA2-SMG1P6H3BVE0 ADK-205ENST00000539909 1866 ntTSL 2 BASIC13.21□□□□□ -0.3
BOLA2-SMG1P6H3BVE0 ZNF384-201ENST00000319770 3266 ntTSL 2 BASIC13.21□□□□□ -0.3
BOLA2-SMG1P6H3BVE0 ZMYM3-207ENST00000373998 6067 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
BOLA2-SMG1P6H3BVE0 ATG10-201ENST00000282185 3033 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
BOLA2-SMG1P6H3BVE0 QRICH1-204ENST00000424300 3009 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.3
BOLA2-SMG1P6H3BVE0 AL645608.3-201ENST00000448179 3043 ntTSL 2 BASIC13.21□□□□□ -0.3
BOLA2-SMG1P6H3BVE0 SLC25A18-202ENST00000399813 2057 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
BOLA2-SMG1P6H3BVE0 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC13.2□□□□□ -0.3
BOLA2-SMG1P6H3BVE0 TSPAN31-201ENST00000257910 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
BOLA2-SMG1P6H3BVE0 TMEM87B-201ENST00000283206 5212 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
BOLA2-SMG1P6H3BVE0 PIAS2-201ENST00000324794 4543 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
BOLA2-SMG1P6H3BVE0 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
BOLA2-SMG1P6H3BVE0 RBMS1-201ENST00000348849 4273 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
BOLA2-SMG1P6H3BVE0 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
BOLA2-SMG1P6H3BVE0 PIK3R3-203ENST00000420542 5174 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
BOLA2-SMG1P6H3BVE0 AC126564.1-201ENST00000623628 2013 ntBASIC13.2□□□□□ -0.3
BOLA2-SMG1P6H3BVE0 PFAS-201ENST00000314666 5371 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
BOLA2-SMG1P6H3BVE0 TRAPPC9-201ENST00000389328 4474 ntTSL 2 BASIC13.2□□□□□ -0.3
BOLA2-SMG1P6H3BVE0 APOBR-201ENST00000431282 3765 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
BOLA2-SMG1P6H3BVE0 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
BOLA2-SMG1P6H3BVE0 AP1B1-202ENST00000357586 4176 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
BOLA2-SMG1P6H3BVE0 SEPT10-202ENST00000397712 3071 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
BOLA2-SMG1P6H3BVE0 ANGPTL2-201ENST00000373417 2575 ntTSL 2 BASIC13.2□□□□□ -0.3
BOLA2-SMG1P6H3BVE0 PEG10-205ENST00000612748 2585 ntAPPRIS P5 TSL 5 BASIC13.2□□□□□ -0.3
BOLA2-SMG1P6H3BVE0 FASN-201ENST00000306749 8565 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
BOLA2-SMG1P6H3BVE0 LINC01024-201ENST00000499203 2769 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
BOLA2-SMG1P6H3BVE0 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC13.2□□□□□ -0.3
BOLA2-SMG1P6H3BVE0 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
BOLA2-SMG1P6H3BVE0 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
BOLA2-SMG1P6H3BVE0 SERTAD2-201ENST00000313349 5549 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
BOLA2-SMG1P6H3BVE0 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC13.2□□□□□ -0.3
BOLA2-SMG1P6H3BVE0 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC13.2□□□□□ -0.3
BOLA2-SMG1P6H3BVE0 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
BOLA2-SMG1P6H3BVE0 MIR662-201ENST00000384847 95 ntBASIC13.2□□□□□ -0.3
BOLA2-SMG1P6H3BVE0 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
BOLA2-SMG1P6H3BVE0 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC13.2□□□□□ -0.3
BOLA2-SMG1P6H3BVE0 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC13.2□□□□□ -0.3
BOLA2-SMG1P6H3BVE0 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
BOLA2-SMG1P6H3BVE0 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC13.2□□□□□ -0.3
BOLA2-SMG1P6H3BVE0 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC13.2□□□□□ -0.3
BOLA2-SMG1P6H3BVE0 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC13.2□□□□□ -0.3
BOLA2-SMG1P6H3BVE0 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC13.2□□□□□ -0.3
BOLA2-SMG1P6H3BVE0 RBM42-202ENST00000586618 771 ntTSL 3 BASIC13.2□□□□□ -0.3
BOLA2-SMG1P6H3BVE0 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
BOLA2-SMG1P6H3BVE0 HYOU1-221ENST00000621959 3358 ntTSL 2 BASIC13.2□□□□□ -0.3
BOLA2-SMG1P6H3BVE0 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
BOLA2-SMG1P6H3BVE0 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC13.2□□□□□ -0.3
BOLA2-SMG1P6H3BVE0 ATG16L1-201ENST00000347464 2915 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
BOLA2-SMG1P6H3BVE0 C16orf45-209ENST00000566490 1854 ntTSL 5 BASIC13.2□□□□□ -0.3
BOLA2-SMG1P6H3BVE0 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC13.2□□□□□ -0.3
BOLA2-SMG1P6H3BVE0 AKAP8-201ENST00000269701 3670 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
BOLA2-SMG1P6H3BVE0 OSBPL2-203ENST00000439951 3886 ntTSL 5 BASIC13.2□□□□□ -0.3
BOLA2-SMG1P6H3BVE0 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
BOLA2-SMG1P6H3BVE0 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
BOLA2-SMG1P6H3BVE0 ATF6B-209ENST00000375201 2624 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
BOLA2-SMG1P6H3BVE0 ATF6B-210ENST00000375203 2620 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
BOLA2-SMG1P6H3BVE0 SNX22-201ENST00000325881 3614 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 77.2 ms