Protein–RNA interactions for Protein: Q9Y6M4

CSNK1G3, Casein kinase I isoform gamma-3, humanhuman

Predictions only

Length 447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G3Q9Y6M4 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC22.55■■□□□ 1.2
CSNK1G3Q9Y6M4 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
CSNK1G3Q9Y6M4 AL136162.1-201ENST00000607711 1078 ntBASIC22.55■■□□□ 1.2
CSNK1G3Q9Y6M4 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
CSNK1G3Q9Y6M4 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC22.55■■□□□ 1.2
CSNK1G3Q9Y6M4 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC22.55■■□□□ 1.2
CSNK1G3Q9Y6M4 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
CSNK1G3Q9Y6M4 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC22.55■■□□□ 1.2
CSNK1G3Q9Y6M4 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC22.55■■□□□ 1.2
CSNK1G3Q9Y6M4 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
CSNK1G3Q9Y6M4 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
CSNK1G3Q9Y6M4 REST-206ENST00000612429 1376 ntTSL 5 BASIC22.54■■□□□ 1.2
CSNK1G3Q9Y6M4 REST-207ENST00000616975 1370 ntTSL 5 BASIC22.54■■□□□ 1.2
CSNK1G3Q9Y6M4 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
CSNK1G3Q9Y6M4 MIR6089-201ENST00000616698 64 ntBASIC22.54■■□□□ 1.2
CSNK1G3Q9Y6M4 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
CSNK1G3Q9Y6M4 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
CSNK1G3Q9Y6M4 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
CSNK1G3Q9Y6M4 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC22.53■■□□□ 1.2
CSNK1G3Q9Y6M4 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
CSNK1G3Q9Y6M4 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
CSNK1G3Q9Y6M4 EBPL-204ENST00000378272 766 ntTSL 3 BASIC22.53■■□□□ 1.2
CSNK1G3Q9Y6M4 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
CSNK1G3Q9Y6M4 DUX4L19-201ENST00000557448 1267 ntBASIC22.53■■□□□ 1.2
CSNK1G3Q9Y6M4 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC22.53■■□□□ 1.2
CSNK1G3Q9Y6M4 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
CSNK1G3Q9Y6M4 SLC6A10P-202ENST00000431994 2058 ntBASIC22.53■■□□□ 1.2
CSNK1G3Q9Y6M4 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC22.52■■□□□ 1.2
CSNK1G3Q9Y6M4 AC131274.2-201ENST00000580697 1507 ntBASIC22.52■■□□□ 1.2
CSNK1G3Q9Y6M4 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
CSNK1G3Q9Y6M4 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC22.52■■□□□ 1.2
CSNK1G3Q9Y6M4 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC22.52■■□□□ 1.2
CSNK1G3Q9Y6M4 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC22.52■■□□□ 1.2
CSNK1G3Q9Y6M4 DUSP8P4-201ENST00000399538 1761 ntBASIC22.52■■□□□ 1.2
CSNK1G3Q9Y6M4 AC135279.3-201ENST00000610945 1311 ntBASIC22.52■■□□□ 1.2
CSNK1G3Q9Y6M4 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC22.51■■□□□ 1.19
CSNK1G3Q9Y6M4 AC142381.2-201ENST00000566120 298 ntBASIC22.51■■□□□ 1.19
CSNK1G3Q9Y6M4 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC22.51■■□□□ 1.19
CSNK1G3Q9Y6M4 EDA-201ENST00000338901 1233 ntBASIC22.5■■□□□ 1.19
CSNK1G3Q9Y6M4 AC092171.4-201ENST00000609130 632 ntBASIC22.5■■□□□ 1.19
CSNK1G3Q9Y6M4 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC22.5■■□□□ 1.19
CSNK1G3Q9Y6M4 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
CSNK1G3Q9Y6M4 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
CSNK1G3Q9Y6M4 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
CSNK1G3Q9Y6M4 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
CSNK1G3Q9Y6M4 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC22.5■■□□□ 1.19
CSNK1G3Q9Y6M4 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
CSNK1G3Q9Y6M4 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
CSNK1G3Q9Y6M4 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC22.49■■□□□ 1.19
CSNK1G3Q9Y6M4 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
CSNK1G3Q9Y6M4 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC22.49■■□□□ 1.19
CSNK1G3Q9Y6M4 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC22.49■■□□□ 1.19
CSNK1G3Q9Y6M4 SUDS3P1-201ENST00000505831 966 ntBASIC22.49■■□□□ 1.19
CSNK1G3Q9Y6M4 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC22.49■■□□□ 1.19
CSNK1G3Q9Y6M4 SF1-220ENST00000626028 704 ntTSL 2 BASIC22.49■■□□□ 1.19
CSNK1G3Q9Y6M4 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
CSNK1G3Q9Y6M4 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
CSNK1G3Q9Y6M4 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC22.48■■□□□ 1.19
CSNK1G3Q9Y6M4 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
CSNK1G3Q9Y6M4 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
CSNK1G3Q9Y6M4 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC22.48■■□□□ 1.19
CSNK1G3Q9Y6M4 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC22.48■■□□□ 1.19
CSNK1G3Q9Y6M4 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
CSNK1G3Q9Y6M4 AL031432.3-201ENST00000607698 485 ntBASIC22.48■■□□□ 1.19
CSNK1G3Q9Y6M4 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
CSNK1G3Q9Y6M4 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC22.48■■□□□ 1.19
CSNK1G3Q9Y6M4 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC22.48■■□□□ 1.19
CSNK1G3Q9Y6M4 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
CSNK1G3Q9Y6M4 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
CSNK1G3Q9Y6M4 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
CSNK1G3Q9Y6M4 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC22.47■■□□□ 1.19
CSNK1G3Q9Y6M4 AC024257.2-201ENST00000549699 147 ntBASIC22.47■■□□□ 1.19
CSNK1G3Q9Y6M4 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC22.47■■□□□ 1.19
CSNK1G3Q9Y6M4 AL355001.2-201ENST00000620617 1191 ntBASIC22.47■■□□□ 1.19
CSNK1G3Q9Y6M4 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
CSNK1G3Q9Y6M4 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC22.47■■□□□ 1.19
CSNK1G3Q9Y6M4 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC22.47■■□□□ 1.19
CSNK1G3Q9Y6M4 AL022069.1-201ENST00000568025 1636 ntBASIC22.46■■□□□ 1.19
CSNK1G3Q9Y6M4 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC22.46■■□□□ 1.19
CSNK1G3Q9Y6M4 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
CSNK1G3Q9Y6M4 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC22.46■■□□□ 1.19
CSNK1G3Q9Y6M4 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
CSNK1G3Q9Y6M4 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC22.46■■□□□ 1.19
CSNK1G3Q9Y6M4 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC22.46■■□□□ 1.19
CSNK1G3Q9Y6M4 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
CSNK1G3Q9Y6M4 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC22.45■■□□□ 1.18
CSNK1G3Q9Y6M4 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC22.45■■□□□ 1.18
CSNK1G3Q9Y6M4 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC22.45■■□□□ 1.18
CSNK1G3Q9Y6M4 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
CSNK1G3Q9Y6M4 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC22.45■■□□□ 1.18
CSNK1G3Q9Y6M4 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC22.45■■□□□ 1.18
CSNK1G3Q9Y6M4 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC22.45■■□□□ 1.18
CSNK1G3Q9Y6M4 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC22.45■■□□□ 1.18
CSNK1G3Q9Y6M4 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC22.45■■□□□ 1.18
CSNK1G3Q9Y6M4 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
CSNK1G3Q9Y6M4 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC22.44■■□□□ 1.18
CSNK1G3Q9Y6M4 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC22.44■■□□□ 1.18
CSNK1G3Q9Y6M4 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC22.44■■□□□ 1.18
CSNK1G3Q9Y6M4 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC22.44■■□□□ 1.18
CSNK1G3Q9Y6M4 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC22.44■■□□□ 1.18
Retrieved 100 of 98,524 protein–RNA pairs in 693.5 ms