Protein–RNA interactions for Protein: Q9Y696

CLIC4, Chloride intracellular channel protein 4, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4Q9Y696 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC26.32■■□□□ 1.8
CLIC4Q9Y696 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC26.31■■□□□ 1.8
CLIC4Q9Y696 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
CLIC4Q9Y696 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
CLIC4Q9Y696 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
CLIC4Q9Y696 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
CLIC4Q9Y696 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC26.31■■□□□ 1.8
CLIC4Q9Y696 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
CLIC4Q9Y696 AC133561.1-201ENST00000568600 2415 ntBASIC26.3■■□□□ 1.8
CLIC4Q9Y696 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
CLIC4Q9Y696 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC26.3■■□□□ 1.8
CLIC4Q9Y696 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
CLIC4Q9Y696 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC26.3■■□□□ 1.8
CLIC4Q9Y696 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC26.3■■□□□ 1.8
CLIC4Q9Y696 CD37-213ENST00000598095 1598 ntTSL 2 BASIC26.29■■□□□ 1.8
CLIC4Q9Y696 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
CLIC4Q9Y696 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
CLIC4Q9Y696 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC26.29■■□□□ 1.8
CLIC4Q9Y696 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC26.29■■□□□ 1.8
CLIC4Q9Y696 IDNK-201ENST00000376417 511 ntTSL 5 BASIC26.29■■□□□ 1.8
CLIC4Q9Y696 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
CLIC4Q9Y696 BHLHE23-202ENST00000612929 1109 ntBASIC26.29■■□□□ 1.8
CLIC4Q9Y696 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC26.29■■□□□ 1.8
CLIC4Q9Y696 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC26.28■■□□□ 1.8
CLIC4Q9Y696 DUSP8P5-201ENST00000422884 1815 ntBASIC26.28■■□□□ 1.8
CLIC4Q9Y696 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
CLIC4Q9Y696 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
CLIC4Q9Y696 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC26.28■■□□□ 1.8
CLIC4Q9Y696 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC26.28■■□□□ 1.8
CLIC4Q9Y696 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
CLIC4Q9Y696 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC26.28■■□□□ 1.8
CLIC4Q9Y696 EI24-213ENST00000618552 1747 ntTSL 5 BASIC26.28■■□□□ 1.8
CLIC4Q9Y696 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
CLIC4Q9Y696 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC26.27■■□□□ 1.8
CLIC4Q9Y696 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
CLIC4Q9Y696 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
CLIC4Q9Y696 AC011551.1-201ENST00000614101 683 ntBASIC26.27■■□□□ 1.8
CLIC4Q9Y696 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC26.27■■□□□ 1.8
CLIC4Q9Y696 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
CLIC4Q9Y696 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
CLIC4Q9Y696 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
CLIC4Q9Y696 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC26.27■■□□□ 1.8
CLIC4Q9Y696 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
CLIC4Q9Y696 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC26.26■■□□□ 1.79
CLIC4Q9Y696 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
CLIC4Q9Y696 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC26.26■■□□□ 1.79
CLIC4Q9Y696 TSPY13P-201ENST00000338964 914 ntBASIC26.26■■□□□ 1.79
CLIC4Q9Y696 BEX3-202ENST00000372634 753 ntTSL 2 BASIC26.26■■□□□ 1.79
CLIC4Q9Y696 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC26.26■■□□□ 1.79
CLIC4Q9Y696 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC26.26■■□□□ 1.79
CLIC4Q9Y696 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC26.26■■□□□ 1.79
CLIC4Q9Y696 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC26.26■■□□□ 1.79
CLIC4Q9Y696 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
CLIC4Q9Y696 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC26.25■■□□□ 1.79
CLIC4Q9Y696 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
CLIC4Q9Y696 AC010980.1-201ENST00000587192 1142 ntBASIC26.25■■□□□ 1.79
CLIC4Q9Y696 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
CLIC4Q9Y696 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
CLIC4Q9Y696 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC26.25■■□□□ 1.79
CLIC4Q9Y696 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC26.24■■□□□ 1.79
CLIC4Q9Y696 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC26.24■■□□□ 1.79
CLIC4Q9Y696 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC26.24■■□□□ 1.79
CLIC4Q9Y696 AC022616.5-201ENST00000518796 181 ntBASIC26.24■■□□□ 1.79
CLIC4Q9Y696 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC26.24■■□□□ 1.79
CLIC4Q9Y696 GAK-223ENST00000628912 497 ntTSL 5 BASIC26.24■■□□□ 1.79
CLIC4Q9Y696 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC26.24■■□□□ 1.79
CLIC4Q9Y696 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
CLIC4Q9Y696 AC131274.2-201ENST00000580697 1507 ntBASIC26.24■■□□□ 1.79
CLIC4Q9Y696 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
CLIC4Q9Y696 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC26.23■■□□□ 1.79
CLIC4Q9Y696 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
CLIC4Q9Y696 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
CLIC4Q9Y696 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC26.23■■□□□ 1.79
CLIC4Q9Y696 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC26.23■■□□□ 1.79
CLIC4Q9Y696 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
CLIC4Q9Y696 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
CLIC4Q9Y696 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC26.22■■□□□ 1.79
CLIC4Q9Y696 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
CLIC4Q9Y696 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC26.22■■□□□ 1.79
CLIC4Q9Y696 ME2-208ENST00000638937 2471 ntTSL 5 BASIC26.22■■□□□ 1.79
CLIC4Q9Y696 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC26.22■■□□□ 1.79
CLIC4Q9Y696 GUK1-208ENST00000366728 842 ntTSL 2 BASIC26.22■■□□□ 1.79
CLIC4Q9Y696 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC26.22■■□□□ 1.79
CLIC4Q9Y696 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
CLIC4Q9Y696 AC120024.1-201ENST00000562672 995 ntBASIC26.22■■□□□ 1.79
CLIC4Q9Y696 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
CLIC4Q9Y696 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
CLIC4Q9Y696 AC068473.5-201ENST00000616428 2072 ntBASIC26.22■■□□□ 1.79
CLIC4Q9Y696 C9orf163-202ENST00000624034 2573 ntBASIC26.22■■□□□ 1.79
CLIC4Q9Y696 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC26.22■■□□□ 1.79
CLIC4Q9Y696 NFE2L3P1-201ENST00000588207 1959 ntBASIC26.22■■□□□ 1.79
CLIC4Q9Y696 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC26.22■■□□□ 1.79
CLIC4Q9Y696 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
CLIC4Q9Y696 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
CLIC4Q9Y696 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
CLIC4Q9Y696 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC26.21■■□□□ 1.79
CLIC4Q9Y696 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC26.21■■□□□ 1.79
CLIC4Q9Y696 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC26.21■■□□□ 1.79
CLIC4Q9Y696 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC26.2■■□□□ 1.78
CLIC4Q9Y696 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
Retrieved 100 of 98,524 protein–RNA pairs in 15.9 ms