Protein–RNA interactions for Protein: Q9Y663

HS3ST3A1, Heparan sulfate glucosamine 3-O-sulfotransferase 3A1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HS3ST3A1Q9Y663 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
HS3ST3A1Q9Y663 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC22.74■■□□□ 1.23
HS3ST3A1Q9Y663 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
HS3ST3A1Q9Y663 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
HS3ST3A1Q9Y663 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC22.73■■□□□ 1.23
HS3ST3A1Q9Y663 UNC93B3-201ENST00000308076 687 ntBASIC22.73■■□□□ 1.23
HS3ST3A1Q9Y663 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC22.73■■□□□ 1.23
HS3ST3A1Q9Y663 PBX2P1-201ENST00000493219 1291 ntBASIC22.73■■□□□ 1.23
HS3ST3A1Q9Y663 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC22.73■■□□□ 1.23
HS3ST3A1Q9Y663 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
HS3ST3A1Q9Y663 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC22.73■■□□□ 1.23
HS3ST3A1Q9Y663 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
HS3ST3A1Q9Y663 AL161729.1-201ENST00000604104 1402 ntBASIC22.73■■□□□ 1.23
HS3ST3A1Q9Y663 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
HS3ST3A1Q9Y663 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC22.73■■□□□ 1.23
HS3ST3A1Q9Y663 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
HS3ST3A1Q9Y663 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC22.72■■□□□ 1.23
HS3ST3A1Q9Y663 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC22.72■■□□□ 1.23
HS3ST3A1Q9Y663 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
HS3ST3A1Q9Y663 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
HS3ST3A1Q9Y663 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC22.72■■□□□ 1.23
HS3ST3A1Q9Y663 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
HS3ST3A1Q9Y663 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
HS3ST3A1Q9Y663 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC22.72■■□□□ 1.23
HS3ST3A1Q9Y663 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC22.72■■□□□ 1.23
HS3ST3A1Q9Y663 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
HS3ST3A1Q9Y663 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC22.71■■□□□ 1.23
HS3ST3A1Q9Y663 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC22.71■■□□□ 1.23
HS3ST3A1Q9Y663 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC22.71■■□□□ 1.23
HS3ST3A1Q9Y663 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
HS3ST3A1Q9Y663 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC22.71■■□□□ 1.23
HS3ST3A1Q9Y663 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC22.7■■□□□ 1.23
HS3ST3A1Q9Y663 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.23
HS3ST3A1Q9Y663 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC22.7■■□□□ 1.23
HS3ST3A1Q9Y663 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
HS3ST3A1Q9Y663 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
HS3ST3A1Q9Y663 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC22.7■■□□□ 1.22
HS3ST3A1Q9Y663 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC22.7■■□□□ 1.22
HS3ST3A1Q9Y663 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
HS3ST3A1Q9Y663 DUX4L19-201ENST00000557448 1267 ntBASIC22.7■■□□□ 1.22
HS3ST3A1Q9Y663 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC22.7■■□□□ 1.22
HS3ST3A1Q9Y663 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC22.7■■□□□ 1.22
HS3ST3A1Q9Y663 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC22.7■■□□□ 1.22
HS3ST3A1Q9Y663 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC22.7■■□□□ 1.22
HS3ST3A1Q9Y663 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC22.7■■□□□ 1.22
HS3ST3A1Q9Y663 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
HS3ST3A1Q9Y663 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC22.7■■□□□ 1.22
HS3ST3A1Q9Y663 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC22.69■■□□□ 1.22
HS3ST3A1Q9Y663 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
HS3ST3A1Q9Y663 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC22.69■■□□□ 1.22
HS3ST3A1Q9Y663 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC22.69■■□□□ 1.22
HS3ST3A1Q9Y663 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC22.69■■□□□ 1.22
HS3ST3A1Q9Y663 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC22.69■■□□□ 1.22
HS3ST3A1Q9Y663 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC22.68■■□□□ 1.22
HS3ST3A1Q9Y663 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC22.68■■□□□ 1.22
HS3ST3A1Q9Y663 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC22.68■■□□□ 1.22
HS3ST3A1Q9Y663 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
HS3ST3A1Q9Y663 AL136162.1-201ENST00000607711 1078 ntBASIC22.68■■□□□ 1.22
HS3ST3A1Q9Y663 MIR935-201ENST00000401179 91 ntBASIC22.67■■□□□ 1.22
HS3ST3A1Q9Y663 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
HS3ST3A1Q9Y663 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
HS3ST3A1Q9Y663 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC22.67■■□□□ 1.22
HS3ST3A1Q9Y663 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC22.67■■□□□ 1.22
HS3ST3A1Q9Y663 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
HS3ST3A1Q9Y663 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
HS3ST3A1Q9Y663 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
HS3ST3A1Q9Y663 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
HS3ST3A1Q9Y663 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC22.66■■□□□ 1.22
HS3ST3A1Q9Y663 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC22.66■■□□□ 1.22
HS3ST3A1Q9Y663 AC092171.4-201ENST00000609130 632 ntBASIC22.66■■□□□ 1.22
HS3ST3A1Q9Y663 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
HS3ST3A1Q9Y663 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
HS3ST3A1Q9Y663 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC22.65■■□□□ 1.22
HS3ST3A1Q9Y663 AC135279.3-201ENST00000610945 1311 ntBASIC22.65■■□□□ 1.22
HS3ST3A1Q9Y663 CD37-213ENST00000598095 1598 ntTSL 2 BASIC22.65■■□□□ 1.22
HS3ST3A1Q9Y663 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC22.65■■□□□ 1.22
HS3ST3A1Q9Y663 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC22.65■■□□□ 1.22
HS3ST3A1Q9Y663 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC22.65■■□□□ 1.22
HS3ST3A1Q9Y663 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
HS3ST3A1Q9Y663 HLA-L-211ENST00000482052 1765 ntBASIC22.65■■□□□ 1.22
HS3ST3A1Q9Y663 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
HS3ST3A1Q9Y663 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC22.65■■□□□ 1.22
HS3ST3A1Q9Y663 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC22.65■■□□□ 1.22
HS3ST3A1Q9Y663 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
HS3ST3A1Q9Y663 SF1-220ENST00000626028 704 ntTSL 2 BASIC22.64■■□□□ 1.21
HS3ST3A1Q9Y663 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC22.64■■□□□ 1.21
HS3ST3A1Q9Y663 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
HS3ST3A1Q9Y663 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC22.64■■□□□ 1.21
HS3ST3A1Q9Y663 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC22.64■■□□□ 1.21
HS3ST3A1Q9Y663 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.21
HS3ST3A1Q9Y663 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
HS3ST3A1Q9Y663 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
HS3ST3A1Q9Y663 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC22.63■■□□□ 1.21
HS3ST3A1Q9Y663 AC024257.2-201ENST00000549699 147 ntBASIC22.63■■□□□ 1.21
HS3ST3A1Q9Y663 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC22.63■■□□□ 1.21
HS3ST3A1Q9Y663 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC22.62■■□□□ 1.21
HS3ST3A1Q9Y663 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC22.62■■□□□ 1.21
HS3ST3A1Q9Y663 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
HS3ST3A1Q9Y663 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
HS3ST3A1Q9Y663 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC22.62■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 62.2 ms